Protein–RNA interactions for Protein: P16410

CTLA4, Cytotoxic T-lymphocyte protein 4, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTLA4P16410 AC118758.3-201ENST00000624628 24137 ntTSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 RN7SKP269-201ENST00000365545 319 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 U3.35-201ENST00000408405 208 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 PPP3R1-203ENST00000409752 851 ntTSL 3 BASIC4.32□□□□□ -1.72
CTLA4P16410 RN7SKP229-201ENST00000410465 302 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 RNA5SP345-201ENST00000410646 108 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.32□□□□□ -1.72
CTLA4P16410 AC005532.2-201ENST00000467154 373 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AC090142.2-201ENST00000483263 416 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 PLSCR5-203ENST00000492200 1058 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 AC008953.1-201ENST00000497334 318 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.32□□□□□ -1.72
CTLA4P16410 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.32□□□□□ -1.72
CTLA4P16410 RNA5SP34-201ENST00000516887 130 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 IGHVIII-67-4-201ENST00000524281 296 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AP000859.1-201ENST00000525536 307 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AP001775.2-201ENST00000531710 334 ntTSL 2 BASIC4.32□□□□□ -1.72
CTLA4P16410 AC110275.1-201ENST00000534420 623 ntAPPRIS P1 TSL 4 BASIC4.32□□□□□ -1.72
CTLA4P16410 MRE11-209ENST00000540013 1212 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 AC137590.1-201ENST00000542422 495 ntTSL 3 BASIC4.32□□□□□ -1.72
CTLA4P16410 AL049839.1-201ENST00000556151 657 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AC087477.6-201ENST00000559595 843 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 SNORA74C-1-201ENST00000580726 201 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 MIR3936-201ENST00000584304 110 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AC015802.3-201ENST00000590241 570 ntTSL 4 BASIC4.32□□□□□ -1.72
CTLA4P16410 AL139407.1-201ENST00000613826 1175 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 MIR8069-1-201ENST00000616627 86 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 MIR8069-2-201ENST00000621412 86 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AC015871.5-202ENST00000623252 701 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AL353662.3-201ENST00000625131 237 ntBASIC4.32□□□□□ -1.72
CTLA4P16410 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 CLVS1-205ENST00000519846 3622 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 SCN3A-202ENST00000360093 9123 ntAPPRIS ALT1 TSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 DCN-201ENST00000052754 7156 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 TDRD3-204ENST00000377894 2484 ntTSL 2 BASIC4.32□□□□□ -1.72
CTLA4P16410 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 ASB14-202ENST00000487349 3179 ntAPPRIS P2 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC4.32□□□□□ -1.72
CTLA4P16410 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC4.32□□□□□ -1.72
CTLA4P16410 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.32□□□□□ -1.72
CTLA4P16410 ECM2-202ENST00000375540 1606 ntTSL 2 BASIC4.32□□□□□ -1.72
CTLA4P16410 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 USP45-204ENST00000369233 2514 ntTSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 AL672167.1-205ENST00000641112 3080 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 WDR7-201ENST00000254442 14083 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 AC092642.1-201ENST00000392417 425 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 GTF3AP1-201ENST00000416942 1004 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 AL121878.1-201ENST00000418638 859 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 E2F6P2-201ENST00000420708 748 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC4.31□□□□□ -1.72
CTLA4P16410 AC093414.1-201ENST00000434712 514 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 RPL7P11-201ENST00000437586 658 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 EEF1B2P5-201ENST00000444820 548 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 LRRC77P-202ENST00000463642 457 ntTSL 4 BASIC4.31□□□□□ -1.72
CTLA4P16410 APOPT1-204ENST00000473127 739 ntTSL 3 BASIC4.31□□□□□ -1.72
CTLA4P16410 RN7SL727P-201ENST00000482164 296 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 AC093305.1-201ENST00000514105 522 ntTSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 RNU6-709P-201ENST00000517257 104 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 AC100802.1-201ENST00000519197 1026 ntTSL 3 BASIC4.31□□□□□ -1.72
CTLA4P16410 AC090572.2-201ENST00000520649 761 ntTSL 3 BASIC4.31□□□□□ -1.72
CTLA4P16410 AC090022.1-201ENST00000546569 311 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 PSMA4-209ENST00000559082 1094 ntAPPRIS P1 TSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.31□□□□□ -1.72
CTLA4P16410 AC011507.1-201ENST00000585364 567 ntTSL 4 BASIC4.31□□□□□ -1.72
CTLA4P16410 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC4.31□□□□□ -1.72
CTLA4P16410 AC006363.1-201ENST00000603806 463 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 AC010424.2-201ENST00000607594 443 ntBASIC4.31□□□□□ -1.72
CTLA4P16410 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC4.31□□□□□ -1.72
CTLA4P16410 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.31□□□□□ -1.72
CTLA4P16410 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4.31□□□□□ -1.72
CTLA4P16410 CDC14A-206ENST00000635056 2056 ntTSL 2 BASIC4.31□□□□□ -1.72
CTLA4P16410 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.31□□□□□ -1.72
CTLA4P16410 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.31□□□□□ -1.72
CTLA4P16410 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTLA4P16410 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC4.3□□□□□ -1.72
CTLA4P16410 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.3□□□□□ -1.72
CTLA4P16410 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.3□□□□□ -1.72
CTLA4P16410 AC093909.5-201ENST00000621839 1799 ntBASIC4.3□□□□□ -1.72
CTLA4P16410 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTLA4P16410 SLC9B1-202ENST00000394789 1735 ntAPPRIS ALT2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTLA4P16410 PLD1-203ENST00000356327 5855 ntAPPRIS P1 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTLA4P16410 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC4.3□□□□□ -1.72
CTLA4P16410 SNORA70-201ENST00000384436 135 ntBASIC4.3□□□□□ -1.72
Retrieved 100 of 98,524 protein–RNA pairs in 71.7 ms