Protein–RNA interactions for Protein: P13765

HLA-DOB, HLA class II histocompatibility antigen, DO beta chain, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOBP13765 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOBP13765 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOBP13765 MEG8-222ENST00000637332 1237 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOBP13765 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOBP13765 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOBP13765 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOBP13765 SEMA6D-210ENST00000558816 4419 ntTSL 5 BASIC4.81□□□□□ -1.64
HLA-DOBP13765 RBMS1-203ENST00000409075 1550 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOBP13765 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOBP13765 KCTD16-201ENST00000507359 13950 ntAPPRIS P1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOBP13765 CTAGE5-207ENST00000396165 3071 ntTSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOBP13765 DCX-202ENST00000358070 9405 ntAPPRIS ALT1 TSL 1 (best) BASIC4.81□□□□□ -1.64
HLA-DOBP13765 AC005261.2-201ENST00000593427 4258 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 NSF-206ENST00000575068 2667 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 CSNK1G3-210ENST00000521364 2580 ntAPPRIS ALT2 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 GLYATL1-202ENST00000317391 1627 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC021237.1-201ENST00000504175 1643 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC008432.1-201ENST00000615912 1320 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 SPINT4-201ENST00000279058 512 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 RNA5SP242-201ENST00000364171 118 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 RNU6-468P-201ENST00000384003 109 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 RNU6-31P-201ENST00000384388 108 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 U3.23-201ENST00000391132 200 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 RNA5SP178-201ENST00000410380 128 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 RPS26P13-201ENST00000419030 330 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 SETP9-201ENST00000423837 832 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AL049749.1-201ENST00000430281 632 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 RPL12P17-201ENST00000432393 498 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 RRM2P4-201ENST00000441721 562 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 HMGB1P26-201ENST00000452520 628 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 RPS3AP53-201ENST00000454716 778 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC023141.9-201ENST00000458734 412 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC104164.3-201ENST00000467363 1258 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC100832.1-201ENST00000471945 383 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 CYCSP20-201ENST00000473154 315 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 RPS17P11-201ENST00000474297 293 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC117394.1-201ENST00000477323 567 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC116562.1-201ENST00000485355 781 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 OR5H3P-201ENST00000502817 919 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC096571.1-202ENST00000506634 735 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC026407.1-201ENST00000518369 204 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC092709.1-201ENST00000521355 1045 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 CIR1P1-201ENST00000524055 1133 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC103855.1-201ENST00000525926 564 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 CD44-AS1-201ENST00000528869 587 ntTSL 4 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC104229.1-201ENST00000561364 255 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 RBM22P1-201ENST00000578589 1214 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 RN7SL356P-201ENST00000582228 248 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AL157938.2-205ENST00000586290 891 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC011492.1-201ENST00000600023 315 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC067838.1-201ENST00000606064 577 ntBASIC4.8□□□□□ -1.64
HLA-DOBP13765 AC245041.2-202ENST00000613389 493 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 LCA5L-203ENST00000380671 2080 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 RAB3GAP1-207ENST00000539493 3161 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 CLIP4-202ENST00000401605 2322 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 C4orf36-203ENST00000473559 2306 ntAPPRIS P1 TSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 DYNC1I2-201ENST00000340296 2589 ntAPPRIS P4 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 MYO9A-203ENST00000444904 7749 ntAPPRIS P2 TSL 5 BASIC4.8□□□□□ -1.64
HLA-DOBP13765 SAMSN1-206ENST00000619120 2028 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 TMEM68-209ENST00000521229 2400 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
HLA-DOBP13765 ZBTB38-202ENST00000441582 3662 ntAPPRIS P1 TSL 2 BASIC4.79□□□□□ -1.64
HLA-DOBP13765 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOBP13765 CASC1-201ENST00000320267 2361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOBP13765 AC011287.1-206ENST00000638774 2642 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOBP13765 CASC19-248ENST00000641674 1356 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 MTND5P11-201ENST00000511037 1812 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 UBXN7-201ENST00000296328 10568 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOBP13765 NPM1-203ENST00000393820 1598 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOBP13765 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOBP13765 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOBP13765 PRKAA1-204ENST00000397128 5088 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOBP13765 RGS17-202ENST00000367225 7773 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
HLA-DOBP13765 RNA5SP335-201ENST00000363817 110 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 BPHL-201ENST00000380368 797 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOBP13765 RNU1-77P-201ENST00000390868 162 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 RPL22P22-201ENST00000395439 379 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 AL513325.1-201ENST00000417716 1034 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 AC241520.1-201ENST00000422654 1099 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 AL034379.1-201ENST00000423216 253 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 PTP4A1P7-201ENST00000423476 514 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 GAPDHP34-201ENST00000432112 823 ntBASIC4.79□□□□□ -1.64
HLA-DOBP13765 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC4.79□□□□□ -1.64
HLA-DOBP13765 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.79□□□□□ -1.64
HLA-DOBP13765 AL353898.1-201ENST00000444055 238 ntBASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 84.9 ms