Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 AC021146.4-201ENST00000309229 279 ntBASIC8.3□□□□□ -1.08
TOP2AP11388 AC084824.1-201ENST00000550917 1005 ntBASIC8.3□□□□□ -1.08
TOP2AP11388 BNIP3P5-201ENST00000562290 498 ntBASIC8.3□□□□□ -1.08
TOP2AP11388 RN7SL652P-201ENST00000577769 300 ntBASIC8.3□□□□□ -1.08
TOP2AP11388 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC8.3□□□□□ -1.08
TOP2AP11388 AL391422.2-201ENST00000602854 361 ntTSL 2 BASIC8.3□□□□□ -1.08
TOP2AP11388 AC006453.5-201ENST00000636451 619 ntBASIC8.3□□□□□ -1.08
TOP2AP11388 ERC1-204ENST00000397203 9118 ntTSL 5 BASIC8.3□□□□□ -1.08
TOP2AP11388 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC8.3□□□□□ -1.08
TOP2AP11388 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
TOP2AP11388 RASA1-203ENST00000506290 3009 ntAPPRIS ALT2 TSL 2 BASIC8.3□□□□□ -1.08
TOP2AP11388 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC8.3□□□□□ -1.08
TOP2AP11388 RNU1-13P-201ENST00000384499 162 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 RPL17P36-201ENST00000420302 549 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 RPS27AP6-201ENST00000427962 448 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 FPGT-203ENST00000467578 601 ntTSL 2 BASIC8.29□□□□□ -1.08
TOP2AP11388 AC023136.1-201ENST00000513093 1105 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TOP2AP11388 APOOP5-203ENST00000565921 410 ntTSL 3 BASIC8.29□□□□□ -1.08
TOP2AP11388 AC004147.1-201ENST00000580658 299 ntTSL 3 BASIC8.29□□□□□ -1.08
TOP2AP11388 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC8.29□□□□□ -1.08
TOP2AP11388 COBLL1-203ENST00000392717 9523 ntAPPRIS ALT2 TSL 5 BASIC8.29□□□□□ -1.08
TOP2AP11388 AC004817.4-201ENST00000602396 3625 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 RASGEF1B-207ENST00000509081 3016 ntAPPRIS ALT1 TSL 5 BASIC8.29□□□□□ -1.08
TOP2AP11388 AL121950.1-201ENST00000624993 2077 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC8.29□□□□□ -1.08
TOP2AP11388 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TOP2AP11388 LSAMP-207ENST00000539563 8821 ntTSL 3 BASIC8.29□□□□□ -1.08
TOP2AP11388 ANKRD26P1-204ENST00000571006 4741 ntTSL 1 (best) BASIC8.29□□□□□ -1.08
TOP2AP11388 LINC01776-201ENST00000418344 2229 ntTSL 2 BASIC8.29□□□□□ -1.08
TOP2AP11388 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC8.29□□□□□ -1.08
TOP2AP11388 TTC37-201ENST00000358746 5706 ntAPPRIS P1 TSL 1 (best) BASIC8.29□□□□□ -1.08
TOP2AP11388 CYP2C8-210ENST00000535898 1799 ntTSL 2 BASIC8.29□□□□□ -1.08
TOP2AP11388 TRIM51GP-201ENST00000534741 1350 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC8.29□□□□□ -1.08
TOP2AP11388 ZNF81-204ENST00000376954 7933 ntAPPRIS P1 TSL 5 BASIC8.29□□□□□ -1.08
TOP2AP11388 TAS2R3-201ENST00000247879 1101 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TOP2AP11388 AL356387.2-201ENST00000422272 243 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 OR5K2-201ENST00000427338 1060 ntAPPRIS P1 BASIC8.29□□□□□ -1.08
TOP2AP11388 RPS3AP54-201ENST00000435535 734 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 AC009652.2-201ENST00000527978 516 ntTSL 5 BASIC8.29□□□□□ -1.08
TOP2AP11388 AC109630.1-202ENST00000560552 579 ntTSL 4 BASIC8.29□□□□□ -1.08
TOP2AP11388 OR7A19P-201ENST00000608051 733 ntBASIC8.29□□□□□ -1.08
TOP2AP11388 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TOP2AP11388 DICER1-212ENST00000541352 5621 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TOP2AP11388 ASXL2-201ENST00000336112 8889 ntAPPRIS ALT2 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOP2AP11388 XIAP-205ENST00000434753 8415 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOP2AP11388 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOP2AP11388 AAK1-203ENST00000409085 11345 ntAPPRIS P1 TSL 5 BASIC8.28□□□□□ -1.08
TOP2AP11388 CCT6B-203ENST00000436961 1639 ntTSL 2 BASIC8.28□□□□□ -1.08
TOP2AP11388 NSD3-206ENST00000527502 4471 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TOP2AP11388 NOS1-201ENST00000317775 12158 ntAPPRIS P1 TSL 1 (best) BASIC8.28□□□□□ -1.08
TOP2AP11388 U3.35-201ENST00000408405 208 ntBASIC8.28□□□□□ -1.08
TOP2AP11388 AC118345.1-201ENST00000411785 366 ntTSL 3 BASIC8.28□□□□□ -1.08
TOP2AP11388 COX5BP7-201ENST00000414780 274 ntBASIC8.28□□□□□ -1.08
TOP2AP11388 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC8.28□□□□□ -1.08
TOP2AP11388 AL121974.1-201ENST00000437859 377 ntTSL 3 BASIC8.28□□□□□ -1.08
TOP2AP11388 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC8.28□□□□□ -1.08
TOP2AP11388 RPL7P32-201ENST00000457119 744 ntBASIC8.28□□□□□ -1.08
TOP2AP11388 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC8.28□□□□□ -1.08
TOP2AP11388 MRPL49P2-201ENST00000521066 465 ntBASIC8.28□□□□□ -1.08
TOP2AP11388 NPM1P6-201ENST00000521088 871 ntBASIC8.28□□□□□ -1.08
TOP2AP11388 AC021351.1-201ENST00000560886 652 ntTSL 5 BASIC8.28□□□□□ -1.08
TOP2AP11388 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC8.28□□□□□ -1.08
TOP2AP11388 AC114781.5-201ENST00000615297 108 ntBASIC8.28□□□□□ -1.08
TOP2AP11388 AC079298.3-201ENST00000624941 977 ntTSL 3 BASIC8.28□□□□□ -1.08
TOP2AP11388 CARF-203ENST00000414439 2099 ntTSL 2 BASIC8.28□□□□□ -1.08
TOP2AP11388 LCMT1-AS2-202ENST00000565214 5666 ntBASIC8.27□□□□□ -1.08
TOP2AP11388 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TOP2AP11388 THOC2-220ENST00000618150 3211 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TOP2AP11388 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC8.27□□□□□ -1.09
TOP2AP11388 AC097063.1-201ENST00000426714 1797 ntBASIC8.27□□□□□ -1.09
TOP2AP11388 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TOP2AP11388 LINC01341-201ENST00000419361 552 ntTSL 2 BASIC8.27□□□□□ -1.09
TOP2AP11388 AL157378.1-201ENST00000424506 265 ntTSL 5 BASIC8.27□□□□□ -1.09
TOP2AP11388 RPS27AP12-201ENST00000429552 465 ntBASIC8.27□□□□□ -1.09
TOP2AP11388 AL162419.1-201ENST00000440674 873 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TOP2AP11388 AC121764.3-201ENST00000465946 384 ntTSL 2 BASIC8.27□□□□□ -1.09
TOP2AP11388 STK26-205ENST00000496850 1186 ntTSL 1 (best) BASIC8.27□□□□□ -1.09
TOP2AP11388 SUMO2P19-201ENST00000518920 295 ntBASIC8.27□□□□□ -1.09
TOP2AP11388 HID1-AS1-201ENST00000577295 815 ntTSL 2 BASIC8.27□□□□□ -1.09
TOP2AP11388 AL035461.2-201ENST00000619201 524 ntBASIC8.27□□□□□ -1.09
TOP2AP11388 AC064875.1-201ENST00000425974 1942 ntTSL 2 BASIC8.27□□□□□ -1.09
TOP2AP11388 PBRM1-202ENST00000337303 4825 ntAPPRIS ALT1 TSL 1 (best) BASIC8.27□□□□□ -1.09
TOP2AP11388 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TOP2AP11388 CR1-204ENST00000367052 7469 ntTSL 5 BASIC8.26□□□□□ -1.09
TOP2AP11388 CR1-205ENST00000367053 7469 ntTSL 5 BASIC8.26□□□□□ -1.09
TOP2AP11388 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC8.26□□□□□ -1.09
TOP2AP11388 SCGB2A2-202ENST00000525380 1305 ntTSL 2 BASIC8.26□□□□□ -1.09
TOP2AP11388 LINC02183-201ENST00000637822 1732 ntTSL 5 BASIC8.26□□□□□ -1.09
TOP2AP11388 PKIB-211ENST00000615438 1936 ntTSL 5 BASIC8.26□□□□□ -1.09
TOP2AP11388 AC034229.2-201ENST00000566945 2508 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TOP2AP11388 LGALSL-202ENST00000409537 3298 ntTSL 5 BASIC8.26□□□□□ -1.09
TOP2AP11388 SYNJ2BP-201ENST00000256366 7015 ntAPPRIS P1 TSL 1 (best) BASIC8.26□□□□□ -1.09
TOP2AP11388 AL031119.1-201ENST00000404707 1879 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 OR7A10-201ENST00000248058 930 ntAPPRIS P1 BASIC8.26□□□□□ -1.09
TOP2AP11388 AL590762.2-201ENST00000395798 571 ntBASIC8.26□□□□□ -1.09
TOP2AP11388 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC8.26□□□□□ -1.09
TOP2AP11388 MTUS2-AS2-202ENST00000434779 720 ntTSL 3 BASIC8.26□□□□□ -1.09
TOP2AP11388 KCND3-IT1-201ENST00000439736 376 ntTSL 3 BASIC8.26□□□□□ -1.09
Retrieved 100 of 98,524 protein–RNA pairs in 87.9 ms