Protein–RNA interactions for Protein: P09017

HOXC4, Homeobox protein Hox-C4, humanhuman

Predicted RBP Predictions only

Length 264 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC4P09017 ZSCAN4-202ENST00000612521 1979 ntAPPRIS P1 TSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 AC018557.1-201ENST00000569274 1790 ntTSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 DOCK10-202ENST00000409592 7288 ntAPPRIS ALT2 TSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 ZNF630-207ENST00000616492 2220 ntAPPRIS ALT2 TSL 5 BASIC4.91□□□□□ -1.62
HOXC4P09017 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
HOXC4P09017 BICRAL-201ENST00000314073 6530 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC4P09017 LINC02060-201ENST00000506041 1626 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC4P09017 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC4P09017 GVINP1-202ENST00000531871 7271 ntBASIC4.9□□□□□ -1.62
HOXC4P09017 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4.9□□□□□ -1.62
HOXC4P09017 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.62
HOXC4P09017 COA1-201ENST00000223336 927 ntAPPRIS P3 TSL 2 BASIC4.9□□□□□ -1.63
HOXC4P09017 LRRC37BP1-201ENST00000398851 714 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 GTF2IP5-201ENST00000414608 731 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 IGKV1OR9-1-201ENST00000424370 284 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 AC244394.2-201ENST00000425109 735 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC4P09017 AL360081.1-201ENST00000428299 555 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 AL359715.2-201ENST00000452402 682 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC4P09017 AC091685.2-201ENST00000454924 864 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 RPS17P2-201ENST00000461663 408 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 MAL2-201ENST00000522112 573 ntTSL 4 BASIC4.9□□□□□ -1.63
HOXC4P09017 LINC01609-202ENST00000522778 566 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC4P09017 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC4P09017 AC091117.1-201ENST00000560967 426 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC4P09017 AC243960.1-203ENST00000595395 599 ntTSL 4 BASIC4.9□□□□□ -1.63
HOXC4P09017 AC104785.1-201ENST00000603220 588 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 AL391358.1-201ENST00000605342 190 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 AC100827.5-201ENST00000615883 426 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 AL049794.2-201ENST00000616301 365 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC4P09017 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.9□□□□□ -1.63
HOXC4P09017 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 AC099654.2-201ENST00000433031 1980 ntBASIC4.9□□□□□ -1.63
HOXC4P09017 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
HOXC4P09017 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 APAF1-205ENST00000547045 3744 ntAPPRIS ALT1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 VWC2L-202ENST00000427124 4480 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 MTRNR2L11-201ENST00000604646 1552 ntAPPRIS P1 BASIC4.9□□□□□ -1.63
HOXC4P09017 DST-205ENST00000370765 8999 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 ZFX-211ENST00000539115 6801 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 SLC15A2-201ENST00000295605 2379 ntTSL 2 BASIC4.9□□□□□ -1.63
HOXC4P09017 RAD51AP1-202ENST00000352618 2113 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
HOXC4P09017 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC4P09017 ADGRG4-202ENST00000394141 8971 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC4P09017 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC4P09017 MAPK10-263ENST00000641052 4307 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 MEG8-223ENST00000638012 3757 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC4P09017 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC4P09017 U3.32-201ENST00000408116 212 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 RNA5SP113-201ENST00000410486 84 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 RPL37P18-201ENST00000411602 243 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 CBX1P3-201ENST00000413296 527 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 CPB2-AS1-201ENST00000415033 747 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC4P09017 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC4P09017 LINC00434-201ENST00000423739 419 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC4P09017 AC008072.1-201ENST00000434254 824 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 RPSAP41-201ENST00000439695 860 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 LINC02096-201ENST00000445035 953 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC4P09017 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC4.89□□□□□ -1.63
HOXC4P09017 RPS29P22-201ENST00000472363 168 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 AC111000.5-201ENST00000506559 1178 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 AC011124.1-204ENST00000522265 562 ntTSL 4 BASIC4.89□□□□□ -1.63
HOXC4P09017 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC4.89□□□□□ -1.63
HOXC4P09017 AC008147.3-201ENST00000548666 354 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 AC009139.2-201ENST00000569032 566 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC4P09017 AC020910.3-201ENST00000603701 874 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 LINC00923-207ENST00000619015 505 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC4P09017 LINC01358-205ENST00000625548 874 ntTSL 5 BASIC4.89□□□□□ -1.63
HOXC4P09017 AC090826.1-202ENST00000562009 3337 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC4P09017 RALGAPA1P1-201ENST00000443361 6232 ntBASIC4.89□□□□□ -1.63
HOXC4P09017 DNAH14-208ENST00000430092 13763 ntAPPRIS P1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC4P09017 IL7R-201ENST00000303115 4626 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC4P09017 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC4.89□□□□□ -1.63
HOXC4P09017 DYRK1A-202ENST00000339659 8654 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
HOXC4P09017 DLG1-216ENST00000450955 2682 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
HOXC4P09017 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC4P09017 STON1-201ENST00000404752 5511 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC4P09017 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC4P09017 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC4P09017 ZNF26-201ENST00000328654 17601 ntAPPRIS P3 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC4P09017 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
HOXC4P09017 THAP12P5-201ENST00000405864 2275 ntBASIC4.88□□□□□ -1.63
HOXC4P09017 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC4.88□□□□□ -1.63
HOXC4P09017 OR1L4-201ENST00000259466 936 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXC4P09017 CLEC7A-203ENST00000310002 425 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC4P09017 NAP1L4P1-201ENST00000319092 1157 ntBASIC4.88□□□□□ -1.63
HOXC4P09017 OR5B17-201ENST00000357377 946 ntAPPRIS P1 BASIC4.88□□□□□ -1.63
HOXC4P09017 C1orf54-202ENST00000369099 600 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
HOXC4P09017 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC4.88□□□□□ -1.63
HOXC4P09017 SNORA70.10-201ENST00000384515 134 ntBASIC4.88□□□□□ -1.63
HOXC4P09017 AL590609.3-201ENST00000411815 210 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC4P09017 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC4.88□□□□□ -1.63
HOXC4P09017 OR13Z1P-201ENST00000416141 834 ntBASIC4.88□□□□□ -1.63
HOXC4P09017 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC4P09017 TEX41-205ENST00000431734 529 ntTSL 4 BASIC4.88□□□□□ -1.63
HOXC4P09017 AC093414.1-201ENST00000434712 514 ntBASIC4.88□□□□□ -1.63
HOXC4P09017 FAM237A-201ENST00000441223 773 ntAPPRIS P1 TSL 2 BASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 103.4 ms