Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 AC239809.3-202ENST00000628902 686 ntTSL 5 BASIC5.26□□□□□ -1.57
APOEP02649 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC5.26□□□□□ -1.57
APOEP02649 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
APOEP02649 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
APOEP02649 WEE2-201ENST00000397541 3061 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
APOEP02649 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
APOEP02649 AC000123.3-201ENST00000624029 4975 ntBASIC5.26□□□□□ -1.57
APOEP02649 ATP13A3-211ENST00000619199 5227 ntTSL 2 BASIC5.26□□□□□ -1.57
APOEP02649 C6orf10-210ENST00000617061 1904 ntAPPRIS ALT2 TSL 5 BASIC5.25□□□□□ -1.57
APOEP02649 ALB-219ENST00000621085 1418 ntTSL 5 BASIC5.25□□□□□ -1.57
APOEP02649 RNF182-207ENST00000537663 3382 ntAPPRIS P1 TSL 4 BASIC5.25□□□□□ -1.57
APOEP02649 AL078599.1-201ENST00000402075 293 ntBASIC5.25□□□□□ -1.57
APOEP02649 AL645733.1-201ENST00000402250 217 ntBASIC5.25□□□□□ -1.57
APOEP02649 AL589647.1-201ENST00000402485 466 ntBASIC5.25□□□□□ -1.57
APOEP02649 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOEP02649 GJA6P-201ENST00000415117 1042 ntBASIC5.25□□□□□ -1.57
APOEP02649 AL139819.1-201ENST00000429420 471 ntTSL 3 BASIC5.25□□□□□ -1.57
APOEP02649 AC092447.2-201ENST00000435487 669 ntBASIC5.25□□□□□ -1.57
APOEP02649 OR7E125P-201ENST00000443450 846 ntBASIC5.25□□□□□ -1.57
APOEP02649 AL157385.1-201ENST00000446973 268 ntBASIC5.25□□□□□ -1.57
APOEP02649 RPL32P9-201ENST00000487963 407 ntBASIC5.25□□□□□ -1.57
APOEP02649 LINC02215-201ENST00000503320 543 ntTSL 4 BASIC5.25□□□□□ -1.57
APOEP02649 LINC02217-201ENST00000505844 687 ntTSL 2 BASIC5.25□□□□□ -1.57
APOEP02649 AP001961.1-201ENST00000515782 526 ntTSL 3 BASIC5.25□□□□□ -1.57
APOEP02649 AP006245.2-201ENST00000522004 300 ntBASIC5.25□□□□□ -1.57
APOEP02649 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.25□□□□□ -1.57
APOEP02649 NDUFB4P11-201ENST00000560510 395 ntBASIC5.25□□□□□ -1.57
APOEP02649 AC020659.1-204ENST00000562920 400 ntTSL 3 BASIC5.25□□□□□ -1.57
APOEP02649 AC007448.1-201ENST00000582714 234 ntBASIC5.25□□□□□ -1.57
APOEP02649 MIR4691-201ENST00000583764 85 ntBASIC5.25□□□□□ -1.57
APOEP02649 AL451049.1-201ENST00000608672 497 ntBASIC5.25□□□□□ -1.57
APOEP02649 AL627230.1-201ENST00000613077 211 ntBASIC5.25□□□□□ -1.57
APOEP02649 AL591926.8-201ENST00000616876 211 ntBASIC5.25□□□□□ -1.57
APOEP02649 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC5.25□□□□□ -1.57
APOEP02649 SLC1A3-202ENST00000381918 3652 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOEP02649 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOEP02649 R3HDM1-201ENST00000264160 4648 ntAPPRIS P3 TSL 1 (best) BASIC5.25□□□□□ -1.57
APOEP02649 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC5.25□□□□□ -1.57
APOEP02649 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
APOEP02649 ZNF652P1-201ENST00000442420 1309 ntBASIC5.24□□□□□ -1.57
APOEP02649 ZKSCAN8-201ENST00000330236 7376 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 FAM197Y3-202ENST00000427622 2325 ntTSL 5 BASIC5.24□□□□□ -1.57
APOEP02649 FAM197Y7-202ENST00000433321 2325 ntTSL 2 BASIC5.24□□□□□ -1.57
APOEP02649 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 CRISP1-201ENST00000329411 1709 ntTSL 5 BASIC5.24□□□□□ -1.57
APOEP02649 INPP4B-201ENST00000262992 3741 ntAPPRIS P1 TSL 5 BASIC5.24□□□□□ -1.57
APOEP02649 IGLJ6-201ENST00000390328 70 ntAPPRIS P1 BASIC5.24□□□□□ -1.57
APOEP02649 VDAC2P1-201ENST00000399358 958 ntBASIC5.24□□□□□ -1.57
APOEP02649 SETP10-201ENST00000424368 814 ntBASIC5.24□□□□□ -1.57
APOEP02649 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC5.24□□□□□ -1.57
APOEP02649 AC092164.1-202ENST00000428036 486 ntTSL 3 BASIC5.24□□□□□ -1.57
APOEP02649 RBMY2QP-201ENST00000429799 1147 ntBASIC5.24□□□□□ -1.57
APOEP02649 AL354896.1-201ENST00000430214 561 ntTSL 4 BASIC5.24□□□□□ -1.57
APOEP02649 BX323845.1-201ENST00000432417 179 ntBASIC5.24□□□□□ -1.57
APOEP02649 LYPLA1P1-201ENST00000434514 622 ntBASIC5.24□□□□□ -1.57
APOEP02649 AC004824.1-201ENST00000439577 311 ntTSL 5 BASIC5.24□□□□□ -1.57
APOEP02649 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC5.24□□□□□ -1.57
APOEP02649 RPL34P20-201ENST00000442771 351 ntBASIC5.24□□□□□ -1.57
APOEP02649 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC5.24□□□□□ -1.57
APOEP02649 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.24□□□□□ -1.57
APOEP02649 RN7SL610P-201ENST00000463845 291 ntBASIC5.24□□□□□ -1.57
APOEP02649 RN7SL97P-201ENST00000486780 299 ntBASIC5.24□□□□□ -1.57
APOEP02649 AC005412.2-201ENST00000492004 341 ntBASIC5.24□□□□□ -1.57
APOEP02649 RN7SL441P-201ENST00000492388 296 ntBASIC5.24□□□□□ -1.57
APOEP02649 RNU6ATAC24P-201ENST00000516811 135 ntBASIC5.24□□□□□ -1.57
APOEP02649 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC5.24□□□□□ -1.57
APOEP02649 AP000676.2-201ENST00000529711 301 ntBASIC5.24□□□□□ -1.57
APOEP02649 MIR4646-201ENST00000580775 63 ntBASIC5.24□□□□□ -1.57
APOEP02649 MYLK-221ENST00000583087 678 ntTSL 4 BASIC5.24□□□□□ -1.57
APOEP02649 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 PTPN13-209ENST00000511467 8076 ntAPPRIS P4 TSL 2 BASIC5.24□□□□□ -1.57
APOEP02649 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC5.24□□□□□ -1.57
APOEP02649 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 ZBTB8A-202ENST00000373510 7075 ntAPPRIS P1 TSL 1 (best) BASIC5.24□□□□□ -1.57
APOEP02649 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 RASAL2-203ENST00000462775 14453 ntAPPRIS ALT2 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 AC063976.2-201ENST00000425667 3556 ntBASIC5.23□□□□□ -1.57
APOEP02649 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC5.23□□□□□ -1.57
APOEP02649 U3.32-201ENST00000408116 212 ntBASIC5.23□□□□□ -1.57
APOEP02649 SNORA77-201ENST00000408716 125 ntBASIC5.23□□□□□ -1.57
APOEP02649 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC5.23□□□□□ -1.57
APOEP02649 AL137845.2-201ENST00000444292 988 ntBASIC5.23□□□□□ -1.57
APOEP02649 IGHV5-78-201ENST00000450948 295 ntBASIC5.23□□□□□ -1.57
APOEP02649 snoU13.20-201ENST00000459180 104 ntBASIC5.23□□□□□ -1.57
APOEP02649 RNA5SP103-201ENST00000459503 118 ntBASIC5.23□□□□□ -1.57
APOEP02649 SSR3-206ENST00000476217 807 ntTSL 3 BASIC5.23□□□□□ -1.57
APOEP02649 RNA5SP43-201ENST00000516559 110 ntBASIC5.23□□□□□ -1.57
APOEP02649 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC5.23□□□□□ -1.57
APOEP02649 AC138360.1-201ENST00000552332 386 ntTSL 3 BASIC5.23□□□□□ -1.57
APOEP02649 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC5.23□□□□□ -1.57
APOEP02649 AC011840.5-201ENST00000582125 771 ntBASIC5.23□□□□□ -1.57
APOEP02649 AC005324.5-201ENST00000584540 571 ntTSL 5 BASIC5.23□□□□□ -1.57
APOEP02649 EIF1P5-201ENST00000585002 234 ntBASIC5.23□□□□□ -1.57
APOEP02649 AC107993.1-201ENST00000591343 684 ntBASIC5.23□□□□□ -1.57
APOEP02649 SSX9-202ENST00000608568 580 ntTSL 4 BASIC5.23□□□□□ -1.57
APOEP02649 MILR1-203ENST00000615220 1196 ntAPPRIS P3 TSL 2 BASIC5.23□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 90.2 ms