Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AC008691.1-207ENST00000636819 4154 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-2O95096 CSNK1G3-205ENST00000510842 1979 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
NKX2-2O95096 PSMA8-205ENST00000612461 1619 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-2O95096 SLC4A7-206ENST00000428386 7385 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 RNA5SP319-201ENST00000362768 119 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 RNA5SP234-201ENST00000363916 119 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 RN7SKP124-201ENST00000364730 341 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 SNORA17A-201ENST00000391185 133 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 ATF1P1-201ENST00000406040 927 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AL355615.1-201ENST00000406187 641 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AC105402.1-201ENST00000413336 545 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 HYALP1-201ENST00000417674 1279 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 EIF4A1P1-201ENST00000420241 934 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 SRSF1P1-201ENST00000424058 520 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 TRBV26OR9-2-201ENST00000432077 293 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 MTND2P2-201ENST00000434633 945 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 LINC01344-202ENST00000449842 571 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-2O95096 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.02□□□□□ -1.61
NKX2-2O95096 AC092754.1-201ENST00000472975 479 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 RPS17P11-201ENST00000474297 293 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AC012123.2-201ENST00000485809 248 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 PPP1R11P1-201ENST00000486095 376 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AC018816.1-205ENST00000489771 509 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-2O95096 TPT1P3-201ENST00000492841 512 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 RPSAP51-201ENST00000497462 645 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 EIF4E-204ENST00000504432 1132 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 AC093535.1-201ENST00000515808 747 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-2O95096 RNU4ATAC18P-201ENST00000516179 126 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 IGHVIII-47-1-201ENST00000518187 331 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AC084706.1-201ENST00000521879 558 ntTSL 2 BASIC5.02□□□□□ -1.61
NKX2-2O95096 AF117829.1-208ENST00000521996 915 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-2O95096 AC124067.3-201ENST00000522643 847 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-2O95096 MTND1P6-201ENST00000523621 946 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AC138701.1-201ENST00000524329 714 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 EIF4A2P5-201ENST00000529914 499 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 OR4A43P-201ENST00000532938 908 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 MIR4307HG-201ENST00000548170 822 ntTSL 3 BASIC5.02□□□□□ -1.61
NKX2-2O95096 TWF1-207ENST00000548315 1170 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 AL049830.4-201ENST00000555149 351 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AL157392.3-211ENST00000599378 509 ntTSL 4 BASIC5.02□□□□□ -1.61
NKX2-2O95096 AC010245.2-201ENST00000606908 1167 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 AC244107.2-201ENST00000611773 76 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 SNORA17.5-201ENST00000630429 132 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AL356118.1-201ENST00000635272 1078 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 AC092813.1-201ENST00000635455 969 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 TMEM30CP-203ENST00000637814 1035 ntBASIC5.02□□□□□ -1.61
NKX2-2O95096 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 ZNF492-201ENST00000456783 4245 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 CFL2-201ENST00000298159 6747 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 POLK-210ENST00000508526 2019 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 AL158064.2-203ENST00000639897 2003 ntTSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 DDX3Y-201ENST00000336079 4445 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 CDKL3-210ENST00000523832 1501 ntAPPRIS ALT2 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
NKX2-2O95096 LARS-201ENST00000274562 2213 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 LINC01847-202ENST00000523311 1762 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 PRLR-203ENST00000348262 1339 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 KCNJ10-205ENST00000638728 4351 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC093311.1-201ENST00000506586 2021 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 PHACTR4-201ENST00000373836 3107 ntAPPRIS P4 TSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 DIRC1-201ENST00000308100 1037 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 OR5K4-201ENST00000354924 966 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
NKX2-2O95096 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC005323.2-201ENST00000399342 583 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-2O95096 RNA5SP178-201ENST00000410380 128 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 ZNRF3-IT1-201ENST00000412798 674 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 IL23R-203ENST00000425614 1295 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 AL360007.1-201ENST00000426166 349 ntTSL 3 BASIC5.01□□□□□ -1.61
NKX2-2O95096 PRKG1-AS1-202ENST00000426785 1111 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
NKX2-2O95096 LINC01798-203ENST00000428590 553 ntTSL 4 BASIC5.01□□□□□ -1.61
NKX2-2O95096 FO393414.1-201ENST00000428697 1184 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AL136987.1-201ENST00000434300 396 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 GSTM5P1-201ENST00000434751 660 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC012075.1-201ENST00000436549 580 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC5.01□□□□□ -1.61
NKX2-2O95096 AC016772.1-201ENST00000444170 1261 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 LINC01496-201ENST00000448761 460 ntTSL 5 BASIC5.01□□□□□ -1.61
NKX2-2O95096 RANP1-206ENST00000455094 651 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.01□□□□□ -1.61
NKX2-2O95096 RN7SL51P-201ENST00000468230 285 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 RPL21P18-201ENST00000469899 480 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 EIF1P7-201ENST00000487533 337 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 RN7SL466P-201ENST00000497546 295 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 IGBP1P4-201ENST00000503202 879 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC021193.1-201ENST00000511607 420 ntBASIC5.01□□□□□ -1.61
NKX2-2O95096 AC104827.1-202ENST00000511917 1049 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms