Protein–RNA interactions for Protein: O43175

PHGDH, D-3-phosphoglycerate dehydrogenase, humanhuman

Known RBP Predictions only

Length 533 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDHO43175 AC137627.1-201ENST00000545761 289 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 MED21-206ENST00000546323 575 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 AC021483.1-201ENST00000560760 539 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 C15orf65-201ENST00000569691 729 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 FOPNL-207ENST00000575073 530 ntTSL 2 BASIC5.69□□□□□ -1.5
PHGDHO43175 MIR3154-201ENST00000577829 84 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC5.69□□□□□ -1.5
PHGDHO43175 NIFKP6-201ENST00000598115 845 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AC022145.1-201ENST00000600673 383 ntTSL 3 BASIC5.69□□□□□ -1.5
PHGDHO43175 VN1R74P-201ENST00000613259 503 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AC245014.3-201ENST00000618589 347 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 AL121895.2-201ENST00000619558 447 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 SNHG5-214ENST00000623001 598 ntTSL 2 BASIC5.69□□□□□ -1.5
PHGDHO43175 SATB1-AS1-263ENST00000630022 622 ntTSL 5 BASIC5.69□□□□□ -1.5
PHGDHO43175 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 EFCAB5-201ENST00000394835 5132 ntAPPRIS P2 TSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 AC027088.4-201ENST00000611559 1947 ntBASIC5.69□□□□□ -1.5
PHGDHO43175 DYNC1I2-202ENST00000397119 2604 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 ADGRL2-222ENST00000627151 5789 ntTSL 5 BASIC5.69□□□□□ -1.5
PHGDHO43175 DBT-201ENST00000370131 1521 ntTSL 1 (best) BASIC5.69□□□□□ -1.5
PHGDHO43175 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC5.69□□□□□ -1.5
PHGDHO43175 FTO-204ENST00000463855 3056 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 C9orf135-AS1-201ENST00000439418 1375 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC111188.2-201ENST00000529697 1387 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 PSG9-202ENST00000270077 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 RAPGEF4-215ENST00000540783 3974 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 ZNF93-201ENST00000343769 2648 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 CALN1-204ENST00000405452 8571 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 MUT-201ENST00000274813 3749 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 AC006145.1-201ENST00000439234 2651 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 SCGB3A2-201ENST00000296694 515 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 CAPZA3-201ENST00000317658 1087 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PHGDHO43175 RN7SKP185-201ENST00000362813 326 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 RNA5SP326-201ENST00000363209 110 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 RNU4-51P-201ENST00000364206 140 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 Y_RNA.472-201ENST00000384322 102 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 RNU6-549P-201ENST00000384433 107 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 TRAV8-7-201ENST00000390456 341 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PHGDHO43175 FAIM-204ENST00000393035 946 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 MTCO1P56-201ENST00000401674 224 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 HIST1H3PS1-201ENST00000404612 417 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 MIR1275-201ENST00000408770 80 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC092745.2-202ENST00000411880 369 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 MRPL53P1-201ENST00000414323 319 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 BMS1P13-201ENST00000417301 885 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 PLA2G12AP2-201ENST00000424744 264 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC090505.2-201ENST00000427064 464 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 TEX41-206ENST00000432608 661 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AL359636.1-201ENST00000433572 522 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AL139294.1-201ENST00000435739 512 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 MEOX2-AS1-201ENST00000442176 697 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 MTCYBP42-201ENST00000444653 1130 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC068135.1-201ENST00000446164 246 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC005002.1-201ENST00000447458 540 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 EEF1B2P3-201ENST00000447718 678 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AL589880.1-201ENST00000448271 287 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 RPS6P2-201ENST00000454208 705 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 RANP1-206ENST00000455094 651 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC004692.2-201ENST00000457315 355 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC023194.2-201ENST00000465398 406 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 LINC02049-201ENST00000490647 747 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 RN7SL193P-201ENST00000491708 276 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 LINC02499-201ENST00000502291 763 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 SCGB3A2-202ENST00000504320 440 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC022441.2-201ENST00000514113 382 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC097537.1-201ENST00000514864 1213 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 AC011632.2-201ENST00000520696 738 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 WBP1LP3-201ENST00000523033 208 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AP003031.2-204ENST00000527219 567 ntTSL 4 BASIC5.68□□□□□ -1.5
PHGDHO43175 DEFB130C-202ENST00000530001 230 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 LINC02411-203ENST00000546180 959 ntTSL 4 BASIC5.68□□□□□ -1.5
PHGDHO43175 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC125612.1-201ENST00000547580 377 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AL133372.3-201ENST00000553082 821 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 OR4U1P-201ENST00000554958 912 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 NPM1P47-201ENST00000560843 856 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC090125.1-201ENST00000581541 493 ntTSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PHGDHO43175 DYNAP-202ENST00000585973 1102 ntAPPRIS ALT2 TSL 3 BASIC5.68□□□□□ -1.5
PHGDHO43175 AC010127.1-205ENST00000595268 567 ntTSL 5 BASIC5.68□□□□□ -1.5
PHGDHO43175 AL050403.2-203ENST00000603180 558 ntTSL 4 BASIC5.68□□□□□ -1.5
PHGDHO43175 AL035411.2-201ENST00000604022 421 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC025811.1-201ENST00000604312 472 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 AC009948.4-201ENST00000604692 675 ntBASIC5.68□□□□□ -1.5
PHGDHO43175 LINC00969-332ENST00000630874 738 ntTSL 5 BASIC5.68□□□□□ -1.5
PHGDHO43175 OR6C3-203ENST00000641740 1093 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
PHGDHO43175 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 FAM170B-AS1-203ENST00000442525 2000 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 AL020995.1-201ENST00000427524 1680 ntTSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 KYAT3-203ENST00000370491 1868 ntAPPRIS ALT1 TSL 2 BASIC5.68□□□□□ -1.5
PHGDHO43175 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 IGF2BP2-AS1-202ENST00000456447 1531 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
PHGDHO43175 NSF-206ENST00000575068 2667 ntTSL 2 BASIC5.68□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 114.3 ms