Protein–RNA interactions for Protein: O00151

PDLIM1, PDZ and LIM domain protein 1, humanhuman

Predictions only

Length 329 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1O00151 CEP290-202ENST00000397838 2421 ntTSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.97□□□□□ -1.61
PDLIM1O00151 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.97□□□□□ -1.61
PDLIM1O00151 SYTL2-217ENST00000528231 3536 ntAPPRIS ALT1 TSL 1 (best) BASIC4.97□□□□□ -1.61
PDLIM1O00151 KCNJ16-211ENST00000615244 4190 ntAPPRIS P1 TSL 4 BASIC4.97□□□□□ -1.61
PDLIM1O00151 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
PDLIM1O00151 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.61
PDLIM1O00151 LCMT1-AS2-202ENST00000565214 5666 ntBASIC4.96□□□□□ -1.61
PDLIM1O00151 F2RL2-201ENST00000296641 3429 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM1O00151 FLJ46284-201ENST00000504861 3421 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 ZNF273-204ENST00000476120 2000 ntAPPRIS P1 TSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 RN7SKP269-201ENST00000365545 319 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 GCNT6-201ENST00000379591 934 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 RNU6-729P-201ENST00000384399 107 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 RMRPP5-201ENST00000411156 267 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 SEPT7P8-201ENST00000413308 775 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 LINC01614-201ENST00000415479 648 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 LINC02542-201ENST00000418567 822 ntTSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 Z98742.1-201ENST00000419801 632 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AC013470.3-201ENST00000420252 1194 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AP001476.3-201ENST00000429512 415 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 FMO7P-201ENST00000436045 768 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AL450996.1-201ENST00000445574 1202 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 RBMY2TP-201ENST00000451162 947 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 YWHAEP1-201ENST00000453697 763 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 RPS26P39-201ENST00000469206 341 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AC108751.2-201ENST00000469993 231 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 RPL7P41-201ENST00000485823 957 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 LINC02147-201ENST00000509367 807 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 FGB-207ENST00000509493 1164 ntTSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AC010226.1-203ENST00000515570 765 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 RNU6-751P-201ENST00000516382 101 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 NPM1P52-201ENST00000518264 846 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 ANKRD49-206ENST00000540349 573 ntTSL 4 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AC022404.1-201ENST00000555320 273 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AL049872.1-201ENST00000556323 322 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AC026992.1-201ENST00000558269 571 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AC087301.1-201ENST00000579037 321 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 MIR1273E-201ENST00000581165 102 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.96□□□□□ -1.62
PDLIM1O00151 RPL27-207ENST00000590864 569 ntTSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.96□□□□□ -1.62
PDLIM1O00151 ZNF667-AS1-207ENST00000592146 668 ntTSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AC011445.2-201ENST00000599274 173 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 HCG18-243ENST00000602498 327 ntTSL 3 BASIC4.96□□□□□ -1.62
PDLIM1O00151 FO393422.1-201ENST00000603908 708 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AC009027.1-201ENST00000604510 479 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AC104695.2-201ENST00000605056 775 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 AC008115.3-201ENST00000614874 549 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 UOX-205ENST00000640983 544 ntTSL 4 BASIC4.96□□□□□ -1.62
PDLIM1O00151 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 PSD3-201ENST00000286485 6665 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM1O00151 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM1O00151 TMEM71-201ENST00000356838 1993 ntAPPRIS P3 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM1O00151 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 SPAM1-203ENST00000402183 1860 ntAPPRIS P4 TSL 5 BASIC4.96□□□□□ -1.62
PDLIM1O00151 AC114786.1-201ENST00000512892 1415 ntBASIC4.96□□□□□ -1.62
PDLIM1O00151 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
PDLIM1O00151 SYT16-205ENST00000568344 13978 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 ZBED6-201ENST00000545588 7979 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 CDC16-202ENST00000252458 1991 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 MRE11-202ENST00000323977 2588 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 ADGRF2-202ENST00000398742 4895 ntAPPRIS P1 TSL 5 BASIC4.95□□□□□ -1.62
PDLIM1O00151 ARHGAP5-206ENST00000539826 4881 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 RNA5SP242-201ENST00000364171 118 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 SH3BGR-203ENST00000380634 816 ntTSL 5 BASIC4.95□□□□□ -1.62
PDLIM1O00151 RNU6-891P-201ENST00000384280 111 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC4.95□□□□□ -1.62
PDLIM1O00151 PCDH15-212ENST00000395442 2970 ntTSL 5 BASIC4.95□□□□□ -1.62
PDLIM1O00151 AC002064.2-201ENST00000420245 289 ntTSL 3 BASIC4.95□□□□□ -1.62
PDLIM1O00151 GAPDHP49-201ENST00000421421 961 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 EIF4A1P7-201ENST00000421800 1220 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.95□□□□□ -1.62
PDLIM1O00151 AL590999.1-204ENST00000430595 638 ntTSL 3 BASIC4.95□□□□□ -1.62
PDLIM1O00151 AL713851.2-201ENST00000431209 332 ntTSL 2 BASIC4.95□□□□□ -1.62
PDLIM1O00151 TMSB4X-204ENST00000451311 628 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
PDLIM1O00151 LDHBP2-201ENST00000456969 1005 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 RN7SL174P-201ENST00000475578 289 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 AC093270.2-201ENST00000486157 792 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 AC109481.1-201ENST00000509173 282 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 LINC02057-202ENST00000511794 577 ntTSL 3 BASIC4.95□□□□□ -1.62
PDLIM1O00151 EIF4A2P5-201ENST00000529914 499 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 SNORD95-201ENST00000579879 68 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC4.95□□□□□ -1.62
PDLIM1O00151 CDC42EP3P1-201ENST00000601004 764 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 GMFG-212ENST00000602185 423 ntTSL 3 BASIC4.95□□□□□ -1.62
PDLIM1O00151 AC011626.1-201ENST00000604710 562 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 AC067838.1-201ENST00000606064 577 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 AC117490.2-201ENST00000610042 594 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 MIR6862-1-201ENST00000613016 70 ntBASIC4.95□□□□□ -1.62
PDLIM1O00151 MIR6862-2-201ENST00000614755 70 ntBASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 78.2 ms