Protein–RNA interactions for Protein: H3BT56

CHKB-CPT1B, CHKB-CPT1B readthrough (NMD candidate) (Fragment), humanhuman

Predictions only

Length 60 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-CPT1BH3BT56 RCAN3-201ENST00000374393 382 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 OR8V1P-201ENST00000395193 873 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC092675.1-201ENST00000409490 561 ntTSL 4 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RNA5SP345-201ENST00000410646 108 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RMRPP5-201ENST00000411156 267 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 STSP1-201ENST00000412493 1151 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 FLJ27354-201ENST00000415584 788 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC069213.1-202ENST00000417011 810 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC109638.1-201ENST00000417406 326 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC007161.1-204ENST00000423039 460 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 PTPN2P1-201ENST00000423212 1072 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL12P34-201ENST00000424532 479 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AL139148.1-201ENST00000427122 680 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC009238.2-201ENST00000431026 355 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 CA1-201ENST00000431316 1232 ntAPPRIS P1 TSL 5 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC009226.1-201ENST00000432413 539 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 CEACAMP1-201ENST00000434624 1035 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 Z82198.2-201ENST00000434741 567 ntTSL 4 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC010086.1-201ENST00000437359 1052 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AL138799.2-201ENST00000439024 343 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 GNA14-AS1-201ENST00000439145 605 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AL583839.2-201ENST00000443716 641 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AL035551.1-201ENST00000446931 348 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 MTND2P25-201ENST00000449028 610 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC013460.1-205ENST00000450695 518 ntTSL 4 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 DIRC3-AS1-201ENST00000452813 557 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 ATP5A1P7-201ENST00000453978 1279 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 SNRPGP5-201ENST00000456003 220 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SL269P-201ENST00000467795 305 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 PPIAP15-201ENST00000479662 484 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 METTL15P1-201ENST00000481421 1045 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RPL7P40-201ENST00000481703 745 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC123768.1-201ENST00000486285 432 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RPS26P15-201ENST00000488067 348 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC073610.1-201ENST00000489971 396 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AP002453.1-201ENST00000492327 668 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RN7SL776P-201ENST00000493390 268 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 IGLV3-26-201ENST00000520756 302 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 IFITM8P-201ENST00000522529 394 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 OR5AZ1P-201ENST00000527448 943 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 KCTD21-AS1-206ENST00000532831 856 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC005868.1-201ENST00000536421 331 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 CCDC60-203ENST00000536742 886 ntAPPRIS ALT2 TSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC022509.1-202ENST00000537525 494 ntTSL 4 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC01619-209ENST00000552277 571 ntTSL 4 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 CRADD-211ENST00000552983 839 ntTSL 5 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 LINC02296-201ENST00000557070 544 ntTSL 4 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC015660.2-201ENST00000561362 323 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC108097.1-201ENST00000568275 534 ntTSL 4 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC091932.1-201ENST00000569381 427 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC005341.1-201ENST00000571086 708 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 MIR3689C-201ENST00000581239 72 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AP005136.2-201ENST00000583253 1049 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AP001011.1-201ENST00000583546 690 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC008521.2-201ENST00000591021 259 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC010649.1-203ENST00000592230 454 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 OR7A5-202ENST00000594432 1029 ntAPPRIS P1 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC073333.2-201ENST00000603589 769 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 QTRT1P1-201ENST00000604344 1078 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 HMGB1P50-201ENST00000605814 607 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 Z98949.1-212ENST00000609820 837 ntTSL 5 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC009309.1-201ENST00000610262 460 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AL512652.1-201ENST00000619006 500 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC012414.7-202ENST00000622705 1090 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC025262.3-201ENST00000623666 360 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AL592295.3-201ENST00000637155 863 ntTSL 5 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 MBD5-221ENST00000637159 902 ntTSL 5 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 ENPP2-202ENST00000259486 3233 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 CEP85L-202ENST00000368488 7118 ntTSL 5 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 SLC17A3-204ENST00000397060 2052 ntAPPRIS P1 TSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 ETV1-205ENST00000405192 4402 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 TCN1-201ENST00000257264 1582 ntAPPRIS P1 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 CNGA1-201ENST00000358519 2627 ntAPPRIS P3 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 TFEC-201ENST00000265440 6628 ntTSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 LYPD6B-202ENST00000409029 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 ATP8B5P-203ENST00000430846 3962 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC114546.3-201ENST00000623582 1734 ntBASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC2.65□□□□□ -1.99
CHKB-CPT1BH3BT56 AC092162.3-201ENST00000624511 1624 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 VDAC3-201ENST00000022615 1355 ntAPPRIS P3 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 PDZK1P1-202ENST00000425209 1350 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SLC39A10-202ENST00000409086 5432 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 WDR89-201ENST00000267522 1687 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 DLG1-213ENST00000443183 2516 ntTSL 2 BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 SCG5-201ENST00000300175 1238 ntAPPRIS P4 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 AC010894.1-201ENST00000313760 361 ntBASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 MACC1-201ENST00000332878 2994 ntAPPRIS P1 TSL 1 (best) BASIC2.64□□□□□ -1.99
CHKB-CPT1BH3BT56 OR9A2-201ENST00000350513 1038 ntAPPRIS P1 BASIC2.64□□□□□ -1.99
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms