Protein–RNA interactions for Protein: Q9Y5B0

CTDP1, RNA polymerase II subunit A C-terminal domain phosphatase, humanhuman

Predicted RBP Predictions only

Length 961 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1Q9Y5B0 AL672167.2-201ENST00000377164 879 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 BPHL-201ENST00000380368 797 ntTSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL049545.1-201ENST00000401856 572 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL121835.1-201ENST00000404250 354 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 ARL2BPP3-201ENST00000421226 480 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL390243.1-201ENST00000422038 708 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 BX510359.3-201ENST00000422168 306 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC008164.1-201ENST00000423925 564 ntTSL 4 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 BRWD1P3-201ENST00000428816 390 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RPS26P4-201ENST00000431743 355 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RPS6P15-201ENST00000431996 751 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 HMGB3P10-201ENST00000434734 572 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC245047.2-201ENST00000441060 530 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL731574.1-201ENST00000447757 456 ntTSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 CD200R1L-202ENST00000448932 750 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RSL24D1P3-201ENST00000449255 495 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL589703.1-201ENST00000456032 256 ntTSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC004129.2-201ENST00000457229 287 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RN7SL547P-201ENST00000490793 290 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL035690.1-201ENST00000490892 383 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 MTCO1P31-201ENST00000506355 492 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 TMEM161B-AS1-208ENST00000507736 630 ntTSL 3 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 LINC02479-201ENST00000508942 630 ntTSL 3 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 ZBED3-AS1-209ENST00000512213 681 ntTSL 3 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC091435.2-201ENST00000514586 565 ntTSL 4 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-276P-201ENST00000516114 96 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 SNORA19.3-201ENST00000516165 130 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AP003354.2-201ENST00000517983 563 ntTSL 4 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 NPM1P52-201ENST00000518264 846 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC008429.4-201ENST00000521201 182 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC091996.1-201ENST00000522274 600 ntTSL 3 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC113386.1-201ENST00000523584 381 ntTSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 EMP1-206ENST00000537612 505 ntTSL 3 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC004825.1-201ENST00000555068 586 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC012379.1-201ENST00000558304 406 ntTSL 3 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC023825.1-201ENST00000566704 1030 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AP000919.1-202ENST00000581139 1264 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 EIF1P5-201ENST00000585002 234 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AL160237.3-201ENST00000604114 1013 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 HMGB1P51-201ENST00000605166 638 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RNU4-5P-201ENST00000607255 135 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AC069234.4-201ENST00000621276 412 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 METTL8-218ENST00000638989 876 ntTSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 METTL8-219ENST00000640734 726 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 TTC39DP-201ENST00000416781 1688 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 SH3YL1-203ENST00000403657 3540 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 ECT2L-203ENST00000423192 4319 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 CD164-207ENST00000504373 1402 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 AP004243.1-201ENST00000529108 1433 ntAPPRIS P1 TSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 CTTNBP2NL-201ENST00000271277 5897 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 CDH19-201ENST00000262150 6341 ntAPPRIS P1 TSL 1 (best) BASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 NLRP3P1-201ENST00000622303 1785 ntBASIC6.57□□□□□ -1.36
CTDP1Q9Y5B0 CPS1-IT1-201ENST00000628368 2306 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 NBPF26-201ENST00000609741 3671 ntTSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AL513185.3-201ENST00000433335 1300 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 LINC02070-201ENST00000460586 1321 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 SDAD1-201ENST00000356260 3017 ntAPPRIS P1 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 OR9K1P-201ENST00000326513 941 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 RNU6-1331P-201ENST00000363658 106 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 RN7SKP28-201ENST00000364770 305 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 CD2-201ENST00000369477 478 ntTSL 2 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 TEX30-204ENST00000376027 1106 ntTSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 HNRNPDP2-201ENST00000406475 478 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 RN7SKP278-201ENST00000410504 342 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AL158827.1-201ENST00000416300 391 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 Z93019.1-201ENST00000416450 973 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 VN1R21P-201ENST00000426703 765 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC092447.2-201ENST00000435487 669 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AL050303.1-201ENST00000444356 458 ntTSL 2 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC107015.1-201ENST00000466902 747 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 RPL35AP19-201ENST00000469425 329 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 LINC02174-201ENST00000508977 553 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 HMGB1P46-201ENST00000520062 610 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC068672.3-201ENST00000524017 824 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 GCSAML-207ENST00000527541 1094 ntAPPRIS ALT2 TSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AP001804.2-201ENST00000533932 910 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 LINC02129-201ENST00000564381 692 ntTSL 5 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 BLOC1S6-209ENST00000565409 616 ntTSL 4 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AP005901.2-201ENST00000581690 525 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC022098.3-201ENST00000590715 315 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 ZNF208-204ENST00000599916 740 ntTSL 1 (best) BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AC092070.1-201ENST00000600257 359 ntTSL 3 BASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 AL022067.1-201ENST00000602426 454 ntBASIC6.56□□□□□ -1.36
CTDP1Q9Y5B0 LINC02343-201ENST00000605909 573 ntTSL 4 BASIC6.56□□□□□ -1.36
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms