Protein–RNA interactions for Protein: Q9Y2D8

SSX2IP, Afadin- and alpha-actinin-binding protein, humanhuman

Predictions only

Length 614 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX2IPQ9Y2D8 AC090424.1-201ENST00000535243 736 ntBASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC078814.2-201ENST00000552996 535 ntTSL 4 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC019322.1-201ENST00000571869 389 ntBASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC090666.1-201ENST00000578241 445 ntBASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 ARL2BPP3-202ENST00000580773 420 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC026741.1-201ENST00000605892 482 ntBASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AL121612.2-201ENST00000612261 482 ntBASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 SLC1A3-215ENST00000612708 3832 ntTSL 5 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC093875.1-201ENST00000623688 504 ntBASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 ZNF788-203ENST00000430298 3941 ntTSL 2 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 OR7A5-201ENST00000322301 4216 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 SYTL2-208ENST00000524452 2733 ntAPPRIS P3 TSL 2 BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 MTERF1-201ENST00000351870 1997 ntAPPRIS P3 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 RGS6-204ENST00000404301 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 RGS6-206ENST00000407322 1497 ntAPPRIS ALT1 TSL 1 (best) BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 MFSD8-219ENST00000641228 2559 ntBASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 AC025428.2-201ENST00000435367 2672 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
SSX2IPQ9Y2D8 ZNF679-202ENST00000421025 1567 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 SOX2-OT-218ENST00000498731 3576 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 DOCK9-207ENST00000442173 7643 ntAPPRIS ALT2 TSL 5 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 ADAM24P-201ENST00000398655 2101 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 LMOD2-202ENST00000458573 2346 ntAPPRIS P1 TSL 2 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 SNORA58B-201ENST00000364259 136 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 CFHR2-201ENST00000367415 1059 ntAPPRIS P2 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 BX248415.1-201ENST00000367421 1043 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RNU6-171P-201ENST00000384354 107 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RNU6ATAC18P-201ENST00000408413 101 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 KCNJ13-203ENST00000410029 1177 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RNU4-27P-201ENST00000410889 139 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 SSR1P2-201ENST00000415208 787 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 LINC00348-201ENST00000428761 948 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RPL7L1P9-201ENST00000431298 745 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC007563.3-201ENST00000433233 371 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AL391097.2-201ENST00000435057 485 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RNFT1P2-201ENST00000443064 757 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 LINC01422-203ENST00000447149 509 ntTSL 4 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 MTCYBP11-201ENST00000447254 1109 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 SBDSP1-204ENST00000453858 737 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC104849.1-201ENST00000462623 405 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RPL32P9-201ENST00000487963 407 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 DWORF-201ENST00000489090 873 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RN7SL447P-201ENST00000494711 245 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 LINC02271-202ENST00000506379 596 ntTSL 4 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 LINC02201-201ENST00000508992 468 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 RNA5SP92-201ENST00000516437 110 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC090150.2-201ENST00000521869 815 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC010376.1-201ENST00000522101 334 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AP002518.2-201ENST00000544925 393 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC108721.1-201ENST00000547088 348 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 LINC02448-201ENST00000548613 583 ntTSL 2 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC023906.4-201ENST00000557898 895 ntTSL 3 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 PWRN4-201ENST00000563016 420 ntTSL 5 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 MIR4509-3-201ENST00000578671 94 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 MIR4509-2-201ENST00000583920 94 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC012616.1-201ENST00000600294 197 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC069431.2-201ENST00000604149 1099 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 MIR7155-201ENST00000615925 56 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 MIR4509-1-201ENST00000618224 94 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC126544.2-201ENST00000625174 749 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AL161756.3-201ENST00000641216 2071 ntBASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 FHL1-218ENST00000543669 2878 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 NELL2-205ENST00000452445 3196 ntAPPRIS P1 TSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 TNRC6B-202ENST00000335727 17933 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 AC079601.1-201ENST00000547824 2791 ntTSL 1 (best) BASIC6.01□□□□□ -1.45
SSX2IPQ9Y2D8 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 KSR2-202ENST00000425217 17008 ntTSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 LIPI-204ENST00000614229 1439 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 RAPGEF4-213ENST00000535187 3707 ntTSL 2 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 ZMAT1-201ENST00000372782 3185 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 CPED1-203ENST00000423795 2189 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 NFE2L2-206ENST00000446151 2399 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 MUC2-202ENST00000613187 4845 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 PRG4-206ENST00000635041 4915 ntAPPRIS ALT2 TSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 RNA5SP234-201ENST00000363916 119 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 RN7SKP6-201ENST00000364795 319 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 STMN1-202ENST00000374291 867 ntAPPRIS P1 TSL 2 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 SSX1-201ENST00000376919 1298 ntAPPRIS P1 TSL 1 (best) BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 OR51F1-201ENST00000380383 960 ntAPPRIS P5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 MTERF4-204ENST00000406593 802 ntTSL 2 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 HYALP1-201ENST00000417674 1279 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 NANOGP4-201ENST00000427230 913 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 LINC02257-202ENST00000433576 720 ntTSL 5 BASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 RPS3AP38-201ENST00000435889 763 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 AC006335.2-201ENST00000437993 330 ntBASIC6□□□□□ -1.45
SSX2IPQ9Y2D8 Z93403.1-202ENST00000440002 713 ntTSL 3 BASIC6□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 73.9 ms