Protein–RNA interactions for Protein: Q9ULL8

SHROOM4, Protein Shroom4, humanhuman

Predictions only

Length 1,493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHROOM4Q9ULL8 MSANTD2-204ENST00000526629 3086 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 CHCHD7-203ENST00000396723 1550 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 RNF150-202ENST00000420921 3673 ntTSL 2 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 ABCC13-202ENST00000463099 3842 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 SLX4IP-201ENST00000334534 6062 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 MANEA-201ENST00000358812 4575 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AP000641.1-201ENST00000531988 1639 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 LINC00317-201ENST00000419069 612 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AL592293.2-201ENST00000422292 996 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 RPL7P57-201ENST00000423238 740 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AC097523.2-201ENST00000435551 652 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AURKAPS2-201ENST00000454983 333 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 OR52A4P-201ENST00000472867 958 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 OR11I1P-201ENST00000486033 954 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 LINC01339-201ENST00000505712 440 ntTSL 2 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 IMPA1P1-201ENST00000510718 842 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 CARD8-211ENST00000519332 500 ntTSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AC093227.2-201ENST00000589357 285 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 MIR7515HG-243ENST00000591400 1067 ntTSL 5 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 MIR6716-201ENST00000613413 80 ntBASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC9.59□□□□□ -0.87
SHROOM4Q9ULL8 C9orf57-201ENST00000377024 1502 ntAPPRIS P2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 CTNND1-214ENST00000526772 4966 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 TUSC7-203ENST00000477539 2415 ntTSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 OR7C1-204ENST00000642000 11290 ntAPPRIS P1 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 EXPH5-203ENST00000525344 6542 ntAPPRIS ALT2 TSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 ENSA-214ENST00000513281 1369 ntTSL 2 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AC092681.1-201ENST00000297369 291 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 WFDC9-201ENST00000326000 659 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 DEFB119-203ENST00000376321 457 ntAPPRIS P3 TSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 RN7SKP263-201ENST00000411194 309 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AL122010.1-201ENST00000429293 720 ntTSL 2 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AC138761.5-201ENST00000433967 325 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AL121584.1-201ENST00000453972 519 ntTSL 3 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 HMGN1P8-201ENST00000463578 288 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 FGB-207ENST00000509493 1164 ntTSL 5 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 RNU6-751P-201ENST00000516382 101 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 PPP1R42-212ENST00000522909 1282 ntAPPRIS ALT2 TSL 5 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AC091073.1-201ENST00000559620 666 ntTSL 3 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AC020915.5-201ENST00000596836 964 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AC112493.1-201ENST00000609836 303 ntTSL 3 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AC021106.3-201ENST00000623925 531 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 ERVFRD-3-201ENST00000578561 1617 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 LINC02388-201ENST00000550678 1975 ntTSL 2 BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 AL137141.1-201ENST00000624622 4836 ntBASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 MKKS-202ENST00000399054 2663 ntAPPRIS P1 TSL 1 (best) BASIC9.58□□□□□ -0.88
SHROOM4Q9ULL8 ALB-214ENST00000509063 1911 ntTSL 5 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 TMLHE-AS1-201ENST00000433624 1702 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AL359538.1-201ENST00000453498 1710 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 SNORA77-201ENST00000408716 125 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 RPL23AP1-201ENST00000428990 471 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AL137845.2-201ENST00000444292 988 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 PSAT1P4-201ENST00000466500 526 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 TMED11P-203ENST00000502630 533 ntTSL 5 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AL133304.2-201ENST00000546376 886 ntTSL 2 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AC104002.2-201ENST00000553919 318 ntTSL 5 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 GLRXP2-201ENST00000555594 321 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AC011270.1-201ENST00000558606 583 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AL356218.2-201ENST00000605264 187 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 MLECP1-201ENST00000615893 709 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AL353684.1-201ENST00000622677 1120 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 RPL7-204ENST00000396467 1526 ntTSL 3 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AP001605.1-201ENST00000420186 2603 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 AC093909.5-201ENST00000621839 1799 ntBASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 TRRAP-204ENST00000446306 12492 ntAPPRIS ALT2 TSL 5 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 SREK1-203ENST00000380918 2433 ntTSL 1 (best) BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 OR2AT4-204ENST00000641593 8733 ntAPPRIS P1 BASIC9.57□□□□□ -0.88
SHROOM4Q9ULL8 NOX4-211ENST00000528341 1899 ntTSL 2 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 RFX4-201ENST00000229387 3378 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 N4BP2L2-IT2-201ENST00000629393 4890 ntBASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 RN7SKP17-201ENST00000411242 351 ntBASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 MED4-AS1-201ENST00000422483 542 ntTSL 2 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AC017019.1-201ENST00000426129 261 ntBASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AC092159.1-201ENST00000433724 493 ntTSL 2 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AC090804.1-201ENST00000448870 490 ntBASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AP003774.2-202ENST00000449694 341 ntTSL 3 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AC000061.1-201ENST00000456270 376 ntTSL 3 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AC016687.1-201ENST00000482574 353 ntBASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AC012339.2-201ENST00000523996 453 ntBASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 AL109766.1-201ENST00000555080 552 ntBASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 C14orf2-211ENST00000557040 472 ntAPPRIS P1 TSL 3 BASIC9.56□□□□□ -0.88
SHROOM4Q9ULL8 GXYLT1P4-203ENST00000616580 641 ntTSL 1 (best) BASIC9.56□□□□□ -0.88
Retrieved 100 of 98,524 protein–RNA pairs in 98.2 ms