Protein–RNA interactions for Protein: Q9P2D1

CHD7, Chromodomain-helicase-DNA-binding protein 7, humanhuman

Predictions only

Length 2,997 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHD7Q9P2D1 AC239809.3-208ENST00000611452 531 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD7Q9P2D1 AL133243.1-201ENST00000614487 366 ntBASIC4.91□□□□□ -1.62
CHD7Q9P2D1 MIR6133-201ENST00000617057 108 ntBASIC4.91□□□□□ -1.62
CHD7Q9P2D1 AC005162.3-201ENST00000609389 3695 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD7Q9P2D1 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC4.91□□□□□ -1.62
CHD7Q9P2D1 WDR35-202ENST00000345530 6960 ntAPPRIS ALT1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHD7Q9P2D1 CLCA1-201ENST00000234701 3310 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CHD7Q9P2D1 AC090673.1-202ENST00000356215 4617 ntTSL 2 BASIC4.91□□□□□ -1.62
CHD7Q9P2D1 FREM1-202ENST00000380880 7324 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 OR7D4-203ENST00000641669 4965 ntAPPRIS P1 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 SPRR2C-201ENST00000290702 219 ntBASIC4.9□□□□□ -1.62
CHD7Q9P2D1 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 AC009495.2-201ENST00000457108 506 ntTSL 2 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 SNORA59A-201ENST00000459326 152 ntBASIC4.9□□□□□ -1.62
CHD7Q9P2D1 RN7SL517P-201ENST00000462240 305 ntBASIC4.9□□□□□ -1.62
CHD7Q9P2D1 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 CHD2-201ENST00000394196 9363 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 POLA1-201ENST00000379059 5440 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 POLA1-206ENST00000611764 5434 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 ZNF85-201ENST00000300540 1531 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 KIAA0391-201ENST00000250377 6118 ntTSL 2 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 LINC00702-203ENST00000608792 6300 ntTSL 4 BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 MECOM-203ENST00000460814 3374 ntTSL 1 (best) BASIC4.9□□□□□ -1.62
CHD7Q9P2D1 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 TRPM3-208ENST00000377105 5957 ntAPPRIS ALT2 TSL 5 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 TLR5-205ENST00000540964 4088 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 AC008147.2-201ENST00000552061 4713 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 CTSS-201ENST00000368985 4107 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 DHFRP3-201ENST00000455595 559 ntBASIC4.9□□□□□ -1.63
CHD7Q9P2D1 AC116553.2-201ENST00000564203 463 ntBASIC4.9□□□□□ -1.63
CHD7Q9P2D1 ZNF555-201ENST00000334241 8557 ntAPPRIS P3 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 LINC01793-201ENST00000409590 2036 ntTSL 2 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 CFHR3-206ENST00000617219 1462 ntTSL 5 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 PIGW-206ENST00000620233 2264 ntAPPRIS P1 TSL 2 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 DMD-222ENST00000474231 5209 ntTSL 5 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 ANKRD44-201ENST00000282272 5147 ntAPPRIS P1 TSL 5 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 PFKFB2-202ENST00000367080 7094 ntAPPRIS P1 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 MBNL3-206ENST00000394311 11263 ntTSL 2 BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 NAV2-202ENST00000360655 10667 ntAPPRIS ALT2 TSL 1 (best) BASIC4.9□□□□□ -1.63
CHD7Q9P2D1 ZC3H14-215ENST00000555900 1762 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AL354766.1-201ENST00000423396 542 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 COX6CP15-201ENST00000426313 211 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC090018.1-201ENST00000434369 367 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 RPL23AP52-201ENST00000439311 478 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 RAD21-203ENST00000517749 1003 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 RN7SL600P-201ENST00000581811 299 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC069061.3-201ENST00000582254 823 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 MIR4298-201ENST00000584380 73 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 LINC00907-211ENST00000601948 795 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC105402.3-203ENST00000608822 885 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 VPS13A-203ENST00000360280 15320 ntAPPRIS P4 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AL354696.2-201ENST00000619407 1910 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 KAT6B-202ENST00000372711 7560 ntAPPRIS ALT2 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC135352.1-201ENST00000506173 1418 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 DGKB-201ENST00000399322 6684 ntAPPRIS P2 TSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 POLR1A-201ENST00000263857 12749 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 KIF1B-211ENST00000620295 8624 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 RNU1-132P-201ENST00000364300 164 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC093578.1-201ENST00000415219 368 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 DPYD-IT1-201ENST00000424982 401 ntTSL 3 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AL355592.1-201ENST00000450292 386 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 GAPDHP14-201ENST00000450472 937 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 LINC01088-208ENST00000511895 795 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AP003497.2-201ENST00000624220 967 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 VPS13B-202ENST00000357162 14019 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 TAF1-204ENST00000423759 7722 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 RTL9-203ENST00000540313 5225 ntAPPRIS P2 TSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 THADA-207ENST00000405975 6114 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 LRRK2-201ENST00000298910 9158 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 IRAK1BP1-204ENST00000607739 1387 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AP2B1-221ENST00000621914 5702 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 TMEM71-210ENST00000523829 1974 ntAPPRIS ALT2 TSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC021146.4-201ENST00000309229 279 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 SNORA63.1-201ENST00000362493 131 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC010163.2-201ENST00000416341 381 ntTSL 2 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 NFYAP1-201ENST00000431953 972 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 SLC9A9-AS2-201ENST00000490153 327 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC025164.1-201ENST00000496249 478 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC027369.5-201ENST00000533838 755 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC006206.2-202ENST00000537714 648 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 AC009117.3-202ENST00000563825 557 ntTSL 4 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 HNRNPCP4-201ENST00000571636 900 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 ZNF540-204ENST00000586792 564 ntTSL 3 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC4.89□□□□□ -1.63
CHD7Q9P2D1 SMG1P6-201ENST00000532337 2930 ntBASIC4.89□□□□□ -1.63
CHD7Q9P2D1 DNAJC9-AS1-204ENST00000440197 2865 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD7Q9P2D1 CD200R1-204ENST00000471858 3679 ntAPPRIS ALT2 TSL 1 (best) BASIC4.88□□□□□ -1.63
CHD7Q9P2D1 PCDH15-201ENST00000320301 6845 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD7Q9P2D1 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CHD7Q9P2D1 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC4.88□□□□□ -1.63
CHD7Q9P2D1 SLC2A3P1-201ENST00000519666 1451 ntBASIC4.88□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 98.5 ms