Protein–RNA interactions for Protein: Q9NUG4

CCM2L, Cerebral cavernous malformations 2 protein-like, humanhuman

Predicted RBP Predictions only

Length 571 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2LQ9NUG4 APOC2-205ENST00000592257 444 ntTSL 3 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AL589863.1-201ENST00000595383 631 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 SNORD96A-201ENST00000606577 79 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AL136097.3-201ENST00000611097 505 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AC100847.1-201ENST00000611316 481 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AL353726.1-201ENST00000614041 1000 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AC105227.2-201ENST00000615075 605 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AC026124.2-201ENST00000621847 656 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AC006840.1-201ENST00000623069 542 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AC004943.3-201ENST00000624116 600 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 ZNF24-201ENST00000261332 6307 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 ADGRF1-203ENST00000371253 5468 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 TCF4-268ENST00000629387 3789 ntAPPRIS ALT1 TSL 5 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 PTPRD-214ENST00000540109 6210 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 METTL9-211ENST00000615720 2890 ntTSL 2 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 PYGO1-202ENST00000563719 2653 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 ZNF436-201ENST00000314011 4071 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 GALNT13-202ENST00000409237 2591 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 ASAH2-202ENST00000395526 6880 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 RAD23B-202ENST00000416373 3835 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 MELK-210ENST00000543751 2400 ntTSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 MMP8-201ENST00000236826 3056 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 PLEKHA1-205ENST00000433307 3704 ntAPPRIS P1 TSL 1 (best) BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 AC138907.8-201ENST00000623981 2256 ntBASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 GABRA1-215ENST00000636573 2262 ntAPPRIS P1 TSL 5 BASIC5.85□□□□□ -1.47
CCM2LQ9NUG4 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 ENPP2-208ENST00000522826 2667 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 ENPP2-201ENST00000075322 2651 ntAPPRIS ALT1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 TMOD2-201ENST00000249700 9191 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 CLMN-201ENST00000298912 12747 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 NCOA3-202ENST00000371998 4668 ntAPPRIS P4 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 PKIB-207ENST00000392491 1379 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC016747.4-201ENST00000462959 1383 ntTSL 2 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 MTND4P31-201ENST00000425607 1343 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 GNGT1-201ENST00000248572 720 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 PPIAP24-201ENST00000328558 471 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 RNU6-707P-201ENST00000364647 95 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 RN7SKP186-201ENST00000365371 303 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL626787.1-201ENST00000366136 594 ntTSL 4 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 SPANXN1-201ENST00000370493 1276 ntAPPRIS P1 TSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 OR52E6-202ENST00000379946 954 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 MRPS6P2-201ENST00000381143 370 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL590290.1-201ENST00000405336 380 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 RPL12P23-201ENST00000405880 490 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL445213.1-201ENST00000412589 747 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 MTND4P22-201ENST00000413116 1169 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL596448.1-201ENST00000415024 392 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 GAPDHP49-201ENST00000421421 961 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 TNPO1P1-201ENST00000423641 1138 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 PRH1-201ENST00000428168 603 ntAPPRIS ALT2 TSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC023481.1-201ENST00000435368 938 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC092106.2-201ENST00000436597 487 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC008269.1-201ENST00000438070 646 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 LINC00376-201ENST00000439454 693 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC044781.1-201ENST00000446193 570 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL355390.2-201ENST00000446691 880 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL133217.1-201ENST00000450980 425 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 TRAPPC2-204ENST00000458511 678 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 SNRPCP3-201ENST00000474888 476 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 GAPDHP39-201ENST00000481866 979 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 TRBV5-2-201ENST00000489095 273 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC104109.1-201ENST00000498563 436 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 EPGN-204ENST00000502358 312 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 EPGN-206ENST00000503098 339 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC104137.1-201ENST00000503625 385 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 LINC02114-201ENST00000503757 801 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 EPGN-207ENST00000505212 285 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC118282.2-201ENST00000508739 374 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 TOMM22P4-201ENST00000511318 336 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 EPGN-209ENST00000514968 312 ntTSL 1 (best) BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 SCARNA21.2-201ENST00000516600 166 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC130404.1-201ENST00000539362 739 ntTSL 2 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 LINC01489-201ENST00000542689 605 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 NPM1P47-201ENST00000560843 856 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL078601.3-201ENST00000573303 535 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 THCAT158-201ENST00000575039 535 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC008914.1-201ENST00000576302 797 ntTSL 3 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC008750.7-201ENST00000600765 559 ntTSL 4 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC098617.1-216ENST00000602099 708 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL138895.2-201ENST00000603019 178 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AC018638.7-201ENST00000605836 1114 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AL021707.7-201ENST00000607991 416 ntBASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 LINC00635-219ENST00000608506 482 ntTSL 5 BASIC5.84□□□□□ -1.47
CCM2LQ9NUG4 AP005137.2-201ENST00000609238 400 ntBASIC5.84□□□□□ -1.47
Retrieved 100 of 98,524 protein–RNA pairs in 535.4 ms