Protein–RNA interactions for Protein: Q9HC56

PCDH9, Protocadherin-9, humanhuman

Predictions only

Length 1,237 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH9Q9HC56 CKAP2-207ENST00000490903 3395 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC003985.2-201ENST00000562268 1669 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 TBC1D23-201ENST00000344949 3656 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC017079.1-201ENST00000333650 415 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 MIR421-201ENST00000365696 85 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 RNU1-74P-201ENST00000384108 171 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 RNU1-149P-201ENST00000390870 161 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AL391361.1-201ENST00000405580 489 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC010745.4-201ENST00000420130 740 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC104333.2-201ENST00000422630 192 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 KRTAP8-2P-201ENST00000440620 186 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 TMEM212-IT1-201ENST00000456146 470 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC011225.1-201ENST00000457751 369 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC109992.2-201ENST00000460977 765 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 RPL7P40-201ENST00000481703 745 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC004069.1-201ENST00000504082 549 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 ZCCHC10-210ENST00000513848 876 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 SNHG27-203ENST00000514222 680 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 RNU6-941P-201ENST00000516346 108 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AL133166.1-205ENST00000548306 569 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC023908.1-201ENST00000559899 567 ntTSL 4 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC018695.5-201ENST00000605872 315 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AP000864.1-201ENST00000609424 650 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AP006248.3-201ENST00000623580 594 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 AC073869.10-201ENST00000642016 354 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 MYBPC1-205ENST00000536007 3512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 MYBPC1-206ENST00000541119 3533 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 FILIP1-202ENST00000370020 4051 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 FAM184A-212ENST00000522284 2721 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
PCDH9Q9HC56 MTCO1P15-201ENST00000529569 1526 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 MAPK10-338ENST00000641647 3362 ntBASIC5.38□□□□□ -1.55
PCDH9Q9HC56 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 CLCA3P-201ENST00000284054 2407 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 MMRN1-202ENST00000394980 5217 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC100778.3-201ENST00000580060 1750 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 IQCM-205ENST00000636414 1844 ntAPPRIS ALT2 TSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 SSMEM1-201ENST00000297819 1159 ntAPPRIS P1 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 RNA5SP183-201ENST00000362452 119 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 MIR105-1-201ENST00000385222 81 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 EI24P3-201ENST00000399046 1062 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AL355143.1-201ENST00000407101 841 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AL731575.1-201ENST00000413564 418 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 RPL35AP24-201ENST00000413846 330 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 GNG5P5-201ENST00000420444 220 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC009238.2-201ENST00000431026 355 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AL353681.1-201ENST00000435828 731 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC009948.1-206ENST00000436616 1020 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 GYG2-AS1-201ENST00000445107 515 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 OR2AO1P-201ENST00000476497 403 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 CARD18-202ENST00000530950 652 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 CKS1BP1-201ENST00000555221 240 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC007225.2-201ENST00000562529 256 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 DIAPH2-AS1-204ENST00000579945 974 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 MIR3176-201ENST00000582210 90 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC006116.4-201ENST00000589671 452 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 UBL5-207ENST00000590068 390 ntAPPRIS P1 TSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 UBA2-208ENST00000592791 910 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC005776.1-201ENST00000603164 290 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC022467.1-201ENST00000614738 749 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC108359.1-201ENST00000616451 1211 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC118658.2-201ENST00000618697 459 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 BX005214.3-202ENST00000619809 325 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AP000648.2-201ENST00000624182 404 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 METTL15-211ENST00000634762 718 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 IRAK4-203ENST00000448290 1381 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 TMEM161B-210ENST00000511218 1351 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 MTCO1P11-201ENST00000429111 1528 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC087257.1-201ENST00000506925 2639 ntTSL 4 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC015813.1-203ENST00000585065 4722 ntTSL 2 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 OR55B1P-203ENST00000641518 2602 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 FKBP7-204ENST00000424785 2834 ntAPPRIS P3 TSL 1 (best) BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 LMNTD1-201ENST00000282881 1718 ntAPPRIS P3 TSL 2 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 MBNL1-203ENST00000324196 5225 ntTSL 5 BASIC5.37□□□□□ -1.55
PCDH9Q9HC56 AC093909.5-201ENST00000621839 1799 ntBASIC5.37□□□□□ -1.55
PCDH9Q9HC56 FAM216B-201ENST00000313851 3243 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 FASTKD3-201ENST00000264669 2402 ntAPPRIS P1 TSL 2 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.36□□□□□ -1.55
PCDH9Q9HC56 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 FAT3-201ENST00000409404 19030 ntAPPRIS P1 TSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 SPATA4-201ENST00000280191 1169 ntAPPRIS P1 TSL 1 (best) BASIC5.36□□□□□ -1.55
PCDH9Q9HC56 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC5.36□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 92.6 ms