Protein–RNA interactions for Protein: Q9H9S3

SEC61A2, Protein transport protein Sec61 subunit alpha isoform 2, humanhuman

Predictions only

Length 476 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SEC61A2Q9H9S3 KANTR-203ENST00000604062 4251 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 AGBL1-201ENST00000441037 3551 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 HMMR-204ENST00000432118 2084 ntAPPRIS ALT2 TSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 POT1-202ENST00000393329 3950 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 ZNF761-203ENST00000454407 3967 ntAPPRIS P1 TSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 ARHGAP29-201ENST00000260526 6087 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 CDC42BPA-201ENST00000334218 10134 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 STRBP-204ENST00000447404 6161 ntAPPRIS P1 TSL 2 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 ARID4A-203ENST00000395168 4051 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
SEC61A2Q9H9S3 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC020656.2-201ENST00000613291 5309 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC006511.3-201ENST00000624929 1783 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 HSD17B4-202ENST00000414835 2551 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 ZNF528-201ENST00000360465 3978 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 ADGRL3-210ENST00000508946 4758 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 CHST9-203ENST00000618847 11388 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 SLC30A7-203ENST00000370112 7898 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 LTA4H-209ENST00000552789 2025 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 RNF133-201ENST00000340112 1445 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 MRE11-204ENST00000407439 2684 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 ZNF208-201ENST00000397126 3992 ntAPPRIS P1 TSL 3 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC092724.1-201ENST00000624623 3397 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 Y_RNA.88-201ENST00000363029 99 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 SNORD35A-201ENST00000363389 86 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 CD84-205ENST00000368051 965 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 MIR142-201ENST00000384835 87 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 RN7SKP281-201ENST00000410472 352 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 RN7SKP263-201ENST00000411194 309 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AL049765.1-201ENST00000416237 573 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AL157884.1-201ENST00000424561 454 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 MTND4P28-201ENST00000426217 387 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC009784.1-201ENST00000426484 460 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC083862.1-201ENST00000427378 1242 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 MTCO2P19-201ENST00000427513 598 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AL035458.1-201ENST00000433096 585 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 E2F3-IT1-201ENST00000433182 400 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 PIK3IP1-AS1-201ENST00000440456 554 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC005297.1-201ENST00000444765 862 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 COX6CP2-201ENST00000444980 225 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 ST6GAL2-IT1-201ENST00000446058 388 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 RPL21P134-201ENST00000453468 483 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 NCK1-AS1-201ENST00000461864 1194 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 SOX2-OT-210ENST00000487240 751 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 BNIP3P41-201ENST00000503774 571 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC018645.1-201ENST00000505003 109 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 LINC02101-201ENST00000505861 725 ntTSL 4 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 MTATP6P22-201ENST00000507369 598 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC079380.1-201ENST00000507844 619 ntTSL 3 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 UGT2A3P7-201ENST00000510485 734 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC008837.2-201ENST00000513076 418 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC106038.2-201ENST00000520706 568 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 CHCHD7-210ENST00000521524 703 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AP003392.2-201ENST00000527269 208 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AL133399.1-201ENST00000527476 298 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AP001317.1-201ENST00000531194 960 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 RPL3P13-201ENST00000550415 216 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC012414.6-201ENST00000568241 401 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 MTCO2P22-201ENST00000603246 681 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC004836.1-201ENST00000623032 634 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC010435.1-201ENST00000623353 1177 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC244205.1-201ENST00000624935 705 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC007389.5-201ENST00000629214 744 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 LINC02495-203ENST00000636704 242 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC018793.2-201ENST00000639584 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 AC018793.3-201ENST00000640805 585 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 5S_rRNA.29-201ENST00000641250 107 ntBASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 CLCN3-204ENST00000504131 5592 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 ALG13-203ENST00000394780 4133 ntAPPRIS P1 TSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 ZNF836-201ENST00000322146 2811 ntAPPRIS ALT2 TSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 CLEC12A-201ENST00000304361 1549 ntAPPRIS P4 TSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 UGT2A2-201ENST00000604021 1544 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 TMEM133-201ENST00000303130 1953 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 TEX11-202ENST00000374320 2224 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 MSL2-202ENST00000434835 2272 ntTSL 2 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 RCAN2-201ENST00000306764 3240 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
SEC61A2Q9H9S3 KIAA1328-201ENST00000280020 4853 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 GPR1-209ENST00000612892 2565 ntAPPRIS P1 TSL 4 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AC125238.2-201ENST00000430003 1440 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 HSPD1P8-201ENST00000400121 1658 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 DHRS9-204ENST00000428522 1678 ntAPPRIS P1 TSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ELOVL6-202ENST00000394607 6454 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 MATR3-203ENST00000502499 2664 ntTSL 5 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 TRIM64-201ENST00000533122 2691 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 TEX41-207ENST00000445791 4635 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 RBMS2-202ENST00000542360 1484 ntTSL 2 BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 ZNF266-207ENST00000592904 4401 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 CXCL8-201ENST00000307407 1705 ntAPPRIS P2 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 CARF-212ENST00000434998 1955 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 C9-201ENST00000263408 2713 ntAPPRIS P1 TSL 1 (best) BASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 AP000432.2-201ENST00000624164 2048 ntBASIC5.66□□□□□ -1.5
SEC61A2Q9H9S3 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC5.66□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 118.7 ms