Protein–RNA interactions for Protein: Q9H270

VPS11, Vacuolar protein sorting-associated protein 11 homolog, humanhuman

Predictions only

Length 941 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS11Q9H270 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC092104.1-201ENST00000497346 1441 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 SMPX-201ENST00000379494 938 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 SNORD94-201ENST00000386037 137 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 RNU6-1242P-201ENST00000391052 103 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 U3.23-201ENST00000391132 200 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AL590867.1-201ENST00000392385 1212 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS11Q9H270 RNU4-72P-201ENST00000410754 173 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 MYL6P5-201ENST00000412707 459 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AL354766.1-201ENST00000423396 542 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 LINC00352-201ENST00000425800 552 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 CCNB1IP1P1-201ENST00000428976 839 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AL035458.1-201ENST00000433096 585 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 LHFPL3-AS1-204ENST00000433514 748 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AL365258.1-201ENST00000440885 247 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 UBE2D3P4-201ENST00000441973 436 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AL358794.1-201ENST00000445689 381 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AC005008.2-202ENST00000447776 439 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC019117.1-204ENST00000451792 442 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC093899.1-201ENST00000457984 376 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AP003385.3-201ENST00000472498 287 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 MBNL1-217ENST00000485509 1023 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 MBNL1-219ENST00000492948 1054 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 NUDT6-203ENST00000502270 678 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS11Q9H270 OR5H3P-201ENST00000502817 919 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AC093325.1-201ENST00000508378 326 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 OR8Q1P-201ENST00000526467 655 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 OR4A2P-201ENST00000527276 913 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AP004247.1-201ENST00000531556 1289 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AC124891.1-201ENST00000536322 519 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 CLEC2B-202ENST00000538152 745 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS11Q9H270 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC084757.2-201ENST00000559165 540 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC133485.5-201ENST00000563407 866 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC091544.5-202ENST00000568297 374 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC106734.1-201ENST00000568646 663 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AL163952.1-202ENST00000569625 600 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 LINC01916-201ENST00000582028 559 ntTSL 4 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC005856.1-201ENST00000585921 286 ntTSL 3 BASIC6.03□□□□□ -1.44
VPS11Q9H270 LINC02073-202ENST00000592081 535 ntTSL 4 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC012594.1-252ENST00000595011 876 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC115522.1-201ENST00000595680 556 ntTSL 4 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC112491.1-201ENST00000602890 248 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC105129.3-201ENST00000605455 485 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 MIR6883-201ENST00000614952 78 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AL589745.2-201ENST00000616366 555 ntTSL 4 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AP004607.9-201ENST00000618202 316 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 AC244258.1-201ENST00000637553 1071 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 UGP2-232ENST00000640075 567 ntTSL 5 BASIC6.03□□□□□ -1.44
VPS11Q9H270 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 C17orf78-203ENST00000611038 1675 ntAPPRIS ALT2 TSL 2 BASIC6.03□□□□□ -1.44
VPS11Q9H270 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC6.03□□□□□ -1.44
VPS11Q9H270 MOCS2-201ENST00000361377 3568 ntTSL 4 BASIC6.03□□□□□ -1.44
VPS11Q9H270 LINC01153-201ENST00000429809 2864 ntTSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 LYVE1-201ENST00000256178 3273 ntAPPRIS P1 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 SMG1P7-201ENST00000565246 2704 ntBASIC6.03□□□□□ -1.44
VPS11Q9H270 NRCAM-210ENST00000425651 3915 ntAPPRIS ALT2 TSL 1 (best) BASIC6.03□□□□□ -1.44
VPS11Q9H270 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.03□□□□□ -1.44
VPS11Q9H270 AC217777.1-201ENST00000570034 1471 ntBASIC6.02□□□□□ -1.44
VPS11Q9H270 CASC15-206ENST00000606851 1889 ntTSL 2 BASIC6.02□□□□□ -1.44
VPS11Q9H270 ABCA10-201ENST00000269081 6362 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 KRT222-202ENST00000394052 1712 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 MTND4P31-201ENST00000425607 1343 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 THAP12P9-201ENST00000503971 2360 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 CWF19L2-201ENST00000282251 3278 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 DSC2-201ENST00000251081 4826 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 ZNF383-201ENST00000352998 6760 ntAPPRIS P1 TSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 ESRRG-224ENST00000616180 5194 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
VPS11Q9H270 DDX4-202ENST00000354991 2324 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS11Q9H270 FRAS1-207ENST00000512123 15624 ntAPPRIS P1 TSL 5 BASIC6.02□□□□□ -1.45
VPS11Q9H270 ZC3H12C-201ENST00000278590 8807 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 OR2B6-201ENST00000244623 942 ntAPPRIS P1 BASIC6.02□□□□□ -1.45
VPS11Q9H270 SULT1C3-201ENST00000329106 915 ntAPPRIS P1 TSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 RNU6-666P-201ENST00000363499 107 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RN7SKP28-201ENST00000364770 305 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 PSMD10-206ENST00000372296 878 ntTSL 5 BASIC6.02□□□□□ -1.45
VPS11Q9H270 RNU6-532P-201ENST00000384318 107 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 TMBIM4-203ENST00000398033 844 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 RN7SKP278-201ENST00000410504 342 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RN7SKP144-201ENST00000411108 279 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RNA5SP498-201ENST00000411342 120 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 MTCO3P41-201ENST00000414801 328 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AL355581.1-201ENST00000415964 830 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 ABCC5-AS1-201ENST00000422946 469 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 MTCO1P43-201ENST00000431831 488 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC094019.1-201ENST00000434678 472 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 MTATP6P13-201ENST00000438531 667 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AL049552.1-201ENST00000444302 577 ntTSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 AC114752.1-201ENST00000448204 289 ntTSL 3 BASIC6.02□□□□□ -1.45
VPS11Q9H270 CYCSP42-201ENST00000450823 238 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 AC007099.1-201ENST00000451622 1185 ntTSL 1 (best) BASIC6.02□□□□□ -1.45
VPS11Q9H270 RPS20P4-201ENST00000461659 355 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 C1orf112-206ENST00000472795 925 ntAPPRIS ALT2 TSL 2 BASIC6.02□□□□□ -1.45
VPS11Q9H270 SNRPCP3-201ENST00000474888 476 ntBASIC6.02□□□□□ -1.45
VPS11Q9H270 RN7SL836P-201ENST00000476140 296 ntBASIC6.02□□□□□ -1.45
Retrieved 100 of 98,524 protein–RNA pairs in 99.5 ms