Protein–RNA interactions for Protein: Q9BZS1

FOXP3, Forkhead box protein P3, humanhuman

Predictions only

Length 431 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXP3Q9BZS1 AC027644.1-201ENST00000419595 298 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 PLA2G12AP2-201ENST00000424744 264 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL353801.1-201ENST00000425541 425 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 DPPA2P1-201ENST00000428060 556 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL049594.1-201ENST00000432834 805 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL035458.1-201ENST00000433096 585 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 LINC00411-201ENST00000436722 461 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL139220.2-214ENST00000437643 614 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 MTND3P1-201ENST00000441336 220 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC022498.1-201ENST00000449845 696 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 PHKA2-AS1-202ENST00000452900 656 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL445687.2-201ENST00000458156 728 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 CTSLP6-201ENST00000458273 1002 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 RNU7-140P-201ENST00000459546 60 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 CCDC75P1-201ENST00000469247 791 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 CPHL1P-204ENST00000482639 584 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 RPS27P20-201ENST00000492051 246 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL024509.2-201ENST00000493462 493 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC104971.1-201ENST00000495117 578 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 GYPA-204ENST00000504786 357 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC122718.2-201ENST00000505325 591 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 THAP6-209ENST00000507556 1134 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC010285.3-201ENST00000511668 676 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 LINC02241-202ENST00000512688 467 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 snoZ278.1-201ENST00000517059 112 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC013652.2-202ENST00000558948 910 ntTSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 PWRN1-208ENST00000567647 561 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 MTCO3P24-201ENST00000572729 782 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC005291.1-201ENST00000577743 641 ntTSL 2 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC091135.1-201ENST00000585943 307 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC063977.7-201ENST00000594454 337 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC022146.1-201ENST00000595307 847 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 ZNF649-AS1-201ENST00000600329 579 ntTSL 4 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC006539.2-201ENST00000601729 572 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 WISP1-OT1-201ENST00000602893 642 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL499605.1-201ENST00000604628 403 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AL008723.3-201ENST00000608926 449 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 DLEU2_1.1-201ENST00000612089 120 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 VN1R74P-201ENST00000613259 503 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 DLEU2_1.2-201ENST00000614667 120 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 ZNF248-209ENST00000615949 518 ntTSL 5 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 MIR6071-201ENST00000616741 78 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC010435.1-201ENST00000623353 1177 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 MIR4278-201ENST00000636094 69 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 LEUTX-202ENST00000638280 667 ntAPPRIS P1 TSL 3 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 KAT14-201ENST00000377681 3483 ntAPPRIS ALT1 TSL 5 BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 ITGB1-201ENST00000302278 3640 ntAPPRIS P2 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 CLRN1-AS1-201ENST00000465576 2045 ntTSL 1 (best) BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 ZNF615-204ENST00000594083 4020 ntAPPRIS ALT2 TSL 1 (best) BASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 TTC39DP-201ENST00000416781 1688 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 AC000367.1-201ENST00000452711 1766 ntBASIC6.52□□□□□ -1.37
FOXP3Q9BZS1 PLEKHA1-201ENST00000368988 3872 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 MCM10-202ENST00000378714 4547 ntAPPRIS ALT2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 HAUS3-201ENST00000243706 5620 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AMY2A-204ENST00000622339 1862 ntAPPRIS P1 TSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 SH3D19-201ENST00000304527 5273 ntAPPRIS P3 TSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 RRN3P1-201ENST00000514813 3645 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 RMDN2-201ENST00000234195 1985 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 UGT2B11-201ENST00000446444 2088 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AL136985.3-202ENST00000636386 2708 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 MIR4435-2HG-207ENST00000439362 1522 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 PSG10P-201ENST00000501199 1500 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 VNN2-206ENST00000525270 1608 ntAPPRIS ALT2 TSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ANK2-226ENST00000612754 6134 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 HTN1-201ENST00000246896 580 ntAPPRIS P1 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ODF3-202ENST00000342593 386 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 RNA5SP279-201ENST00000365513 117 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 SPINK9-201ENST00000377906 453 ntAPPRIS P2 TSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 RNU6-1200P-201ENST00000384162 107 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 RNU6-1119P-201ENST00000384349 108 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC233728.1-201ENST00000418049 218 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AL645939.3-201ENST00000435408 225 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ARMC4P1-201ENST00000438905 707 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 CDC27P1-201ENST00000445384 715 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC007383.1-201ENST00000445875 636 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC104763.1-201ENST00000475274 360 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC005017.1-201ENST00000482002 490 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 SATB1-216ENST00000491519 1000 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC113349.1-201ENST00000512105 583 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 LINC01598-206ENST00000513381 499 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 LINC02364-201ENST00000514802 687 ntTSL 2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC011853.1-201ENST00000518911 454 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC090796.1-201ENST00000520370 567 ntTSL 4 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC104212.3-201ENST00000522044 444 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 HIGD1AP17-201ENST00000554576 276 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC006530.1-201ENST00000555980 571 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC138907.2-201ENST00000561479 866 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC145350.4-201ENST00000562827 866 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC136619.2-201ENST00000563361 631 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC027104.1-201ENST00000563702 681 ntBASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC022655.1-201ENST00000578039 288 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ZNF790-AS1-201ENST00000587278 653 ntTSL 5 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 SETSIP-202ENST00000596516 909 ntAPPRIS P2 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 AC007308.1-201ENST00000608856 373 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 ANKRD36C-207ENST00000612359 650 ntTSL 1 (best) BASIC6.51□□□□□ -1.37
FOXP3Q9BZS1 MIR6085-201ENST00000618314 110 ntBASIC6.51□□□□□ -1.37
Retrieved 100 of 98,524 protein–RNA pairs in 74.5 ms