Protein–RNA interactions for Protein: Q9BYV6

TRIM55, Tripartite motif-containing protein 55, humanhuman

Predictions only

Length 548 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM55Q9BYV6 AC025871.2-201ENST00000522589 511 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 RSF1-IT2-201ENST00000529656 566 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC121758.1-202ENST00000556917 658 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 GTF2IP8-201ENST00000560687 584 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 C15orf41-205ENST00000563167 772 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC005951.1-201ENST00000576706 485 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 OR4K7P-201ENST00000580232 945 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC002398.1-201ENST00000589397 427 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC006557.3-201ENST00000592926 517 ntTSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 LINC01966-201ENST00000595809 821 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 ZRANB2-AS2-215ENST00000596952 624 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 ZNF43-209ENST00000598288 560 ntTSL 4 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AL390838.2-201ENST00000602394 274 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 WBP1LP12-201ENST00000604449 331 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AL390816.3-201ENST00000604527 1066 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC097505.1-201ENST00000610199 565 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC004223.4-201ENST00000612426 332 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC024255.1-201ENST00000614376 102 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 uc_338.29-201ENST00000615099 168 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 NEAT1-205ENST00000616315 483 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC005514.1-201ENST00000623521 208 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AF246928.1-201ENST00000623768 87 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC091965.5-201ENST00000624785 342 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 CDRT1-208ENST00000630868 794 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC073869.7-201ENST00000640874 297 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 DNAJC10-208ENST00000537515 1669 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 HELLS-205ENST00000394036 3131 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AFP-201ENST00000226359 1914 ntTSL 5 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC010531.4-202ENST00000569872 1718 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 PIK3C2A-201ENST00000265970 8227 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AGTR1-205ENST00000461609 1545 ntAPPRIS P1 TSL 3 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC011912.1-201ENST00000623483 5819 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 FGF1-213ENST00000610990 3802 ntAPPRIS P1 TSL 4 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 LINC01619-203ENST00000549802 2169 ntTSL 2 BASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AP002512.4-202ENST00000641599 4530 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 AC010132.4-201ENST00000569883 1368 ntBASIC6.44□□□□□ -1.38
TRIM55Q9BYV6 PKIA-AS1-202ENST00000522302 2011 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AL442128.2-201ENST00000620246 1824 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 ARCN1-202ENST00000359415 4038 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AL121768.1-201ENST00000613917 2544 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 TBC1D23-202ENST00000394144 3677 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 NLN-202ENST00000502464 8354 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 FLJ12825-201ENST00000515617 3942 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 FAM216B-202ENST00000537894 3300 ntAPPRIS P1 TSL 4 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 ZNF737-201ENST00000427401 2867 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 DEFB118-201ENST00000253381 1158 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 OR1Q1-201ENST00000297913 945 ntAPPRIS P1 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 Y_RNA.201-201ENST00000364052 96 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 TUBD1-204ENST00000376094 1154 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 NUDT5-203ENST00000378940 1126 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 ATP5J-206ENST00000400099 492 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 RPL23AP17-201ENST00000401064 499 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 GRM7-AS3-202ENST00000417482 454 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AL512363.1-201ENST00000425089 586 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC017002.2-201ENST00000426124 792 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 LINC01674-201ENST00000427446 504 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 MTCO3P5-201ENST00000433620 714 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AP006216.1-201ENST00000439104 419 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AL022237.1-201ENST00000446663 358 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC022431.1-201ENST00000450941 438 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 MTND1P16-201ENST00000465177 898 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC104339.1-201ENST00000465478 348 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 B4GALNT2P1-201ENST00000508857 307 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 HNRNPKP5-201ENST00000515300 253 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 RNA5SP135-201ENST00000517019 125 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC092709.1-201ENST00000521355 1045 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 NAP1L1P1-201ENST00000524793 1063 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC118942.1-202ENST00000529081 578 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AF235103.1-201ENST00000530223 439 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AP001893.3-201ENST00000532357 569 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 LINC00944-203ENST00000542248 548 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC004217.3-201ENST00000551552 878 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 HNRNPCP1-201ENST00000556181 766 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC087286.3-201ENST00000561409 953 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 OR4H6P-201ENST00000563771 921 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AL136084.2-222ENST00000589105 885 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC020914.2-201ENST00000598220 430 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 LINC02109-204ENST00000602801 563 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 Z98949.1-207ENST00000609157 814 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC015574.1-202ENST00000616588 456 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AL607023.1-201ENST00000620045 248 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC005858.1-201ENST00000620193 677 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 LINC00284-211ENST00000620454 534 ntTSL 4 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AP001264.1-201ENST00000620602 703 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 RACK1-235ENST00000626067 564 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 LINC01955-201ENST00000626392 792 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 LINC01440-210ENST00000629744 541 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 5S_rRNA.29-201ENST00000641250 107 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 RANBP3L-204ENST00000515759 1532 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 LMO3-225ENST00000541295 3498 ntTSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC044839.1-206ENST00000635559 1324 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 KMT2E-216ENST00000622386 1588 ntTSL 5 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 NLRP11-204ENST00000592953 3077 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 MYBL1-206ENST00000524176 2148 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 AC005725.1-201ENST00000577346 2607 ntBASIC6.43□□□□□ -1.38
TRIM55Q9BYV6 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC6.43□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 67.1 ms