Protein–RNA interactions for Protein: Q9BY12

SCAPER, S phase cyclin A-associated protein in the endoplasmic reticulum, humanhuman

Predictions only

Length 1,400 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCAPERQ9BY12 MIR7853-201ENST00000584820 132 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 KIAA1524-208ENST00000625495 147 ntTSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 OR52N4-202ENST00000641350 1276 ntAPPRIS P1 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 MAPK10-263ENST00000641052 4307 ntBASIC7.42□□□□□ -1.22
SCAPERQ9BY12 ADGRL3-218ENST00000514996 4731 ntAPPRIS ALT2 TSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 AC007491.1-202ENST00000637961 1576 ntTSL 5 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 VPS50-220ENST00000544910 5736 ntTSL 2 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 OPRM1-217ENST00000522236 2459 ntTSL 1 (best) BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 CDK14-206ENST00000436577 4787 ntTSL 2 BASIC7.42□□□□□ -1.22
SCAPERQ9BY12 EDA2R-203ENST00000396050 3429 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 THRB-203ENST00000396671 7506 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 PDE4D-216ENST00000507116 3350 ntAPPRIS P1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 GTF2IRD2P1-202ENST00000618962 3055 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 ZNF402P-201ENST00000404435 3100 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 DPCR1-202ENST00000462446 5314 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 RNA5SP345-201ENST00000410646 108 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 GUSBP6-201ENST00000434932 640 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 CBX1P1-201ENST00000440184 427 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 RPS17P2-201ENST00000461663 408 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 TATDN1-202ENST00000517678 815 ntTSL 3 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 TATDN1-206ENST00000519548 889 ntTSL 1 (best) BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 BUD31P1-201ENST00000521828 359 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AC087379.1-201ENST00000524613 993 ntTSL 5 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 NPM1P5-201ENST00000557228 838 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AC022523.3-201ENST00000559643 410 ntTSL 3 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 MIR3939-201ENST00000582614 106 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AC022726.1-201ENST00000587475 207 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AC010618.3-202ENST00000598141 476 ntTSL 3 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AC008782.1-201ENST00000603386 430 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 RNA5SP439-201ENST00000617595 124 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AL022401.1-201ENST00000619498 108 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AC019206.1-201ENST00000621938 425 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 BX088651.2-201ENST00000425493 3614 ntTSL 2 BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AFTPH-204ENST00000409933 2811 ntAPPRIS ALT1 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 C6orf10-207ENST00000533191 2170 ntAPPRIS ALT2 TSL 1 (best) BASIC7.41□□□□□ -1.22
SCAPERQ9BY12 RBPJP2-201ENST00000618187 1444 ntBASIC7.41□□□□□ -1.22
SCAPERQ9BY12 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 OFD1P9Y-201ENST00000417699 1491 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AC004076.2-201ENST00000620532 3323 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 TEX35-205ENST00000367643 802 ntAPPRIS ALT2 TSL 2 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 MIR134-201ENST00000385258 73 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AL357515.1-201ENST00000402967 542 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 LINC01047-201ENST00000415193 778 ntTSL 5 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AC009506.2-201ENST00000420635 840 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AL645608.4-201ENST00000423619 154 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 GAS5-208ENST00000425771 242 ntTSL 3 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AC090804.1-201ENST00000448870 490 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 NSMCE2-206ENST00000519010 848 ntTSL 2 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AC009142.1-202ENST00000562565 563 ntTSL 2 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AC103876.1-201ENST00000568634 418 ntTSL 3 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AC004232.3-201ENST00000622977 525 ntBASIC7.4□□□□□ -1.22
SCAPERQ9BY12 AC006994.2-202ENST00000639259 3828 ntTSL 5 BASIC7.4□□□□□ -1.22
SCAPERQ9BY12 PDGFRA-206ENST00000508170 2202 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SCAPERQ9BY12 AC140134.1-201ENST00000511830 3544 ntBASIC7.4□□□□□ -1.23
SCAPERQ9BY12 AL157938.3-201ENST00000502188 3084 ntTSL 4 BASIC7.4□□□□□ -1.23
SCAPERQ9BY12 R3HDM1-202ENST00000409478 4272 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SCAPERQ9BY12 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SCAPERQ9BY12 OR4F5-202ENST00000641515 2618 ntAPPRIS P1 BASIC7.4□□□□□ -1.23
SCAPERQ9BY12 PARP15-206ENST00000493645 1311 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SCAPERQ9BY12 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC7.4□□□□□ -1.23
SCAPERQ9BY12 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 IQCB2P-201ENST00000401788 1633 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 ZCCHC6-204ENST00000375957 2262 ntTSL 2 BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 RNA5SP28-201ENST00000363841 119 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 MIR23A-201ENST00000385245 73 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 SNORA48.7-201ENST00000391302 135 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 POU6F2-AS1-201ENST00000433519 381 ntTSL 3 BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 BX842559.2-201ENST00000451418 605 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC104971.1-201ENST00000495117 578 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC097486.1-201ENST00000515331 210 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC007527.1-202ENST00000543347 382 ntTSL 3 BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC133555.2-201ENST00000550213 292 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 RN7SL802P-201ENST00000577858 299 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AP005059.1-201ENST00000578391 456 ntTSL 2 BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC010424.2-201ENST00000607594 443 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC092683.1-209ENST00000612970 1105 ntTSL 5 BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 OLFM3-201ENST00000338858 2189 ntAPPRIS ALT1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 DNA2-201ENST00000358410 4208 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 PMCHL2-201ENST00000415808 1841 ntTSL 1 (best) BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 PCDH18-201ENST00000344876 5906 ntAPPRIS P3 TSL 1 (best) BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC093671.1-201ENST00000624981 2929 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 AC239868.2-201ENST00000564237 4527 ntBASIC7.39□□□□□ -1.23
SCAPERQ9BY12 PARD3B-214ENST00000622699 7442 ntTSL 5 BASIC7.39□□□□□ -1.23
SCAPERQ9BY12 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC7.38□□□□□ -1.23
SCAPERQ9BY12 DAAM1-202ENST00000395125 5806 ntAPPRIS P3 TSL 1 (best) BASIC7.38□□□□□ -1.23
Retrieved 100 of 98,524 protein–RNA pairs in 89 ms