Protein–RNA interactions for Protein: Q9BUN5

CCDC28B, Coiled-coil domain-containing protein 28B, humanhuman

Predictions only

Length 200 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28BQ9BUN5 RNA5SP319-201ENST00000362768 119 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC083799.1-201ENST00000366451 910 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 SSX5-203ENST00000376923 1208 ntAPPRIS ALT2 TSL 5 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 Z99289.1-206ENST00000425503 393 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC002504.1-201ENST00000438281 691 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 SUMO2P3-201ENST00000438311 288 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC234781.1-201ENST00000444722 459 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AL009050.1-201ENST00000445278 426 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AL035530.1-201ENST00000446887 331 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 NDUFB2-213ENST00000476470 482 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC006499.4-201ENST00000510947 694 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC074087.1-201ENST00000512059 724 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC124854.1-201ENST00000512210 511 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 RN7SKP183-201ENST00000517169 324 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC068389.4-201ENST00000531379 689 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 DYNLL1P4-201ENST00000549314 266 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC079035.1-201ENST00000551713 848 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AL591770.1-201ENST00000554475 1131 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC067805.1-201ENST00000559344 470 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 LINC00933-205ENST00000560917 449 ntTSL 3 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC010547.6-201ENST00000571789 193 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 CYCSP40-201ENST00000575927 294 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AL136164.2-201ENST00000602823 732 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC067773.1-201ENST00000603284 1094 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AL158196.1-201ENST00000616786 434 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AP001005.3-201ENST00000622049 129 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC093909.5-201ENST00000621839 1799 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 FOXP2-204ENST00000390668 1472 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 NRG1-220ENST00000539990 2401 ntTSL 2 BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 THAP12P8-201ENST00000447914 2115 ntBASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 C15orf41-212ENST00000567389 2618 ntTSL 1 (best) BASIC4.93□□□□□ -1.62
CCDC28BQ9BUN5 AC068446.1-201ENST00000556425 1549 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 LRIT3-202ENST00000594814 3566 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 INPP4B-215ENST00000509777 4334 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 RNU1-108P-201ENST00000362556 161 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 MTND3P20-201ENST00000407663 186 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 SEPT7P8-201ENST00000413308 775 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 LINC00626-201ENST00000420691 955 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 LINC01704-202ENST00000442358 649 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 OR52Y1P-201ENST00000452418 828 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 CTSLP6-201ENST00000458273 1002 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC004692.2-202ENST00000458680 478 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 HMGN1P8-201ENST00000463578 288 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 TM4SF1-AS1-202ENST00000496491 754 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC095056.1-201ENST00000503918 425 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 MTND2P31-201ENST00000512602 616 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC016885.1-201ENST00000517796 532 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC124242.1-205ENST00000517798 646 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 LINC00944-201ENST00000536517 421 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 RBM7-208ENST00000545678 867 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AF107885.2-202ENST00000557653 448 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 RPL10P14-201ENST00000565265 298 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC011824.2-202ENST00000578602 533 ntTSL 4 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC090415.2-201ENST00000584078 374 ntTSL 3 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC009303.3-201ENST00000591103 736 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC108865.2-201ENST00000606881 432 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AL139220.2-221ENST00000628123 395 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 RNF123-214ENST00000629802 207 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 AC092435.4-201ENST00000623012 4159 ntBASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 METTL15-201ENST00000303459 4068 ntTSL 2 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 HACD3-211ENST00000569894 1471 ntTSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 PIGA-206ENST00000542278 3626 ntAPPRIS P1 TSL 5 BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 HMMR-203ENST00000393915 3102 ntAPPRIS ALT2 TSL 1 (best) BASIC4.92□□□□□ -1.62
CCDC28BQ9BUN5 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 SLCO1C1-208ENST00000545102 2868 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 CEPT1-211ENST00000615636 1966 ntTSL 5 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 ING3-201ENST00000315870 3777 ntAPPRIS P1 TSL 1 (best) BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 RN7SKP113-201ENST00000363891 295 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 SSX3-202ENST00000376893 800 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 NUDT19P3-201ENST00000404698 555 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AL512422.1-201ENST00000407033 553 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 SLC20A1P1-201ENST00000413906 956 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AC095032.2-201ENST00000414923 418 ntTSL 2 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AL020993.1-201ENST00000420172 297 ntTSL 3 BASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 FABP7P1-201ENST00000424004 391 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 CKS1BP6-201ENST00000424932 240 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 RPS4XP16-201ENST00000427198 791 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 AL450023.3-201ENST00000440592 271 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 TXNP5-201ENST00000441043 315 ntBASIC4.91□□□□□ -1.62
CCDC28BQ9BUN5 Z80107.2-201ENST00000445127 392 ntBASIC4.91□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 92.5 ms