Protein–RNA interactions for Protein: Q9BSH5

HDHD3, Haloacid dehalogenase-like hydrolase domain-containing protein 3, humanhuman

Predicted RBP Predictions only

Length 251 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HDHD3Q9BSH5 AC008663.1-201ENST00000519821 455 ntTSL 4 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 OR4A46P-201ENST00000527255 933 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AP003400.1-201ENST00000528319 231 ntTSL 5 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 HNF1A-AS1-203ENST00000537361 659 ntTSL 3 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC087477.6-201ENST00000559595 843 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC009113.2-201ENST00000563182 403 ntTSL 3 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 EIF1P5-201ENST00000585002 234 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC093484.5-201ENST00000585048 304 ntTSL 3 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC004448.4-204ENST00000585389 743 ntTSL 5 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 ZNF227-204ENST00000586228 569 ntTSL 2 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC009303.3-201ENST00000591103 736 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC105254.2-201ENST00000603636 436 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC015982.1-201ENST00000608113 465 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC079395.2-201ENST00000610982 737 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AC015660.5-201ENST00000623238 564 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 AP002505.2-201ENST00000623585 696 ntBASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 NAIP-210ENST00000523981 4543 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 RBBP6-202ENST00000348022 5739 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 DNAH7-202ENST00000409063 1845 ntTSL 1 (best) BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 MYBPC1-208ENST00000547405 3834 ntAPPRIS ALT2 TSL 1 (best) BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 CCDC178-202ENST00000383096 3391 ntAPPRIS ALT2 TSL 5 BASIC4.16□□□□□ -1.74
HDHD3Q9BSH5 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.15□□□□□ -1.74
HDHD3Q9BSH5 AP002518.1-201ENST00000534904 3837 ntTSL 1 (best) BASIC4.15□□□□□ -1.74
HDHD3Q9BSH5 TRIM69-201ENST00000329464 1901 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.74
HDHD3Q9BSH5 AC019072.1-201ENST00000604535 1551 ntBASIC4.15□□□□□ -1.74
HDHD3Q9BSH5 CASC19-206ENST00000641028 1430 ntBASIC4.15□□□□□ -1.74
HDHD3Q9BSH5 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC4.15□□□□□ -1.74
HDHD3Q9BSH5 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.74
HDHD3Q9BSH5 RNA5SP183-201ENST00000362452 119 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 OR2W1-201ENST00000377175 1028 ntAPPRIS P1 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC007068.1-201ENST00000396690 844 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AL592291.1-201ENST00000403830 352 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 DUTP5-201ENST00000406790 469 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 RNA5SP178-201ENST00000410380 128 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 EIF4A1P1-201ENST00000420241 934 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 HSPE1P16-201ENST00000426640 348 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC092162.1-201ENST00000432828 434 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC084149.1-201ENST00000437233 284 ntTSL 5 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 FOCAD-AS1-201ENST00000439876 359 ntTSL 2 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 SEPT7P3-201ENST00000455017 621 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 LINC01921-201ENST00000456163 393 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC023141.9-201ENST00000458734 412 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC112206.1-201ENST00000468416 477 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC091544.1-201ENST00000484702 348 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 UBA52P7-201ENST00000486088 380 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC020890.1-201ENST00000491837 504 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 SPTSSB-202ENST00000497137 880 ntAPPRIS P1 TSL 3 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC079858.1-201ENST00000507842 448 ntTSL 3 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC147055.1-201ENST00000509261 750 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 HDAC2-AS2-207ENST00000518470 563 ntTSL 4 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 EIF4A2P5-201ENST00000529914 499 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC090844.2-201ENST00000578802 436 ntTSL 4 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 FKBP1AP1-201ENST00000594588 318 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AC079791.1-201ENST00000605356 973 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 SSX9-202ENST00000608568 580 ntTSL 4 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 AL356752.1-201ENST00000615844 593 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 CCDC25-212ENST00000640944 261 ntTSL 5 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 PPP1R9A-207ENST00000433881 9928 ntAPPRIS P1 TSL 5 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 DDX18P5-201ENST00000534547 1306 ntBASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 XIST-204ENST00000429829 19275 ntTSL 1 (best) BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 ZNF382-204ENST00000439428 2742 ntAPPRIS ALT2 TSL 1 (best) BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 ZNF83-203ENST00000541777 3743 ntAPPRIS P1 TSL 1 (best) BASIC4.15□□□□□ -1.75
HDHD3Q9BSH5 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC006148.1-201ENST00000484322 4310 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 CRISP1-204ENST00000507853 1793 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 DDX18P6-201ENST00000450119 1997 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 VCAM1-202ENST00000347652 2812 ntTSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 PTPN13-202ENST00000411767 8119 ntAPPRIS ALT2 TSL 1 (best) BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 RN7SKP74-201ENST00000362849 309 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC244453.4-201ENST00000419150 388 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 MAGI2-AS1-201ENST00000428298 472 ntTSL 3 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AC241644.1-201ENST00000431525 446 ntTSL 3 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 UBE2V2P3-201ENST00000433562 437 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 RAB9AP5-201ENST00000437794 597 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AL138899.2-201ENST00000439139 499 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 RPL34P20-201ENST00000442771 351 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 RAB9AP2-201ENST00000443911 597 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 AL354714.3-201ENST00000447284 493 ntBASIC4.14□□□□□ -1.75
HDHD3Q9BSH5 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC4.14□□□□□ -1.75
Retrieved 100 of 98,524 protein–RNA pairs in 92.8 ms