Protein–RNA interactions for Protein: Q96SZ6

CDK5RAP1, CDK5 regulatory subunit-associated protein 1, humanhuman

Known RBP Predictions only

Length 601 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP1Q96SZ6 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC00308-201ENST00000419431 727 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL139008.2-201ENST00000420315 395 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 RPL34P3-201ENST00000421454 338 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL390962.1-201ENST00000421507 526 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC104843.2-201ENST00000427666 297 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 BX323845.3-201ENST00000428215 527 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC093422.3-201ENST00000428506 305 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL138775.1-201ENST00000429539 575 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF965P-201ENST00000432501 817 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01880-201ENST00000446593 561 ntTSL 4 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 HMGB1P26-201ENST00000452520 628 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC079896.1-201ENST00000455845 488 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 NDUFA12P1-201ENST00000455914 406 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 MTCO2P18-201ENST00000457151 658 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC092754.2-201ENST00000463506 460 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 SRRM1P2-201ENST00000464531 1192 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC020779.1-201ENST00000478757 796 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 PPIAP19-201ENST00000486414 492 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 RPL7P51-201ENST00000490532 749 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 THAP6-205ENST00000504190 1004 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC112518.2-201ENST00000508565 425 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC116353.3-201ENST00000511215 249 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 MTND3P5-201ENST00000512798 333 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 GPX8-208ENST00000515370 1036 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC062004.1-202ENST00000524014 246 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 OR52E8-201ENST00000537935 1061 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 SOX9-AS1-214ENST00000540802 578 ntTSL 4 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 GNG2-208ENST00000554875 430 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC008015.1-201ENST00000555505 465 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL163952.1-202ENST00000569625 600 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC103808.4-201ENST00000577258 391 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC090403.1-202ENST00000582108 833 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 EIF1P5-201ENST00000585002 234 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC005771.1-201ENST00000585581 349 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL136311.1-213ENST00000586466 520 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC125494.3-201ENST00000602759 455 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AP000403.1-201ENST00000603349 851 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 PRKCQ-AS1-208ENST00000608453 587 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC093673.2-201ENST00000609674 331 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC121761.2-201ENST00000617300 689 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC091965.5-201ENST00000624785 342 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC004160.1-201ENST00000625468 929 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL139220.2-223ENST00000625982 921 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AJ009632.2-209ENST00000634853 933 ntTSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL392088.2-201ENST00000637607 285 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AC103706.2-201ENST00000638080 240 ntBASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AFF2-201ENST00000286437 12280 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 PUM2-202ENST00000338086 6112 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF699-203ENST00000591998 3358 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 CHD2-202ENST00000420239 2221 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 CX3CR1-201ENST00000358309 3151 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 SLC12A6-204ENST00000397707 4194 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 AL080276.2-201ENST00000637995 2090 ntTSL 3 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 LRRC37B-204ENST00000543378 3091 ntAPPRIS ALT2 TSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF721-201ENST00000338977 4492 ntTSL 2 BASIC6.11□□□□□ -1.43
CDK5RAP1Q96SZ6 CLEC6A-201ENST00000382073 1682 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 YPEL5-202ENST00000379519 2499 ntAPPRIS P1 TSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF638-201ENST00000264447 6505 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 ALB-220ENST00000621628 1606 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 KLHL13-206ENST00000469946 2353 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 LINC01179-201ENST00000507838 2163 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 DLG1-210ENST00000422288 2854 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 DAOA-201ENST00000329625 1433 ntAPPRIS ALT2 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC027279.1-201ENST00000568885 4284 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 CLSPN-202ENST00000318121 4169 ntAPPRIS P3 TSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 PPP2R5E-202ENST00000422769 3478 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 TRIM77-201ENST00000398290 1353 ntAPPRIS P1 TSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 SAMSN1-202ENST00000400564 1382 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 MIR421-201ENST00000365696 85 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 SLAMF6-201ENST00000368055 730 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 SNORA17A-201ENST00000391185 133 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RPL23AP17-201ENST00000401064 499 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL451046.1-201ENST00000406097 534 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RNA5SP178-201ENST00000410380 128 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RN7SKP29-201ENST00000410957 272 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RN7SKP263-201ENST00000411194 309 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC013286.1-201ENST00000412137 381 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RAP1BP1-201ENST00000412709 553 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 RBMS3-AS1-201ENST00000414547 554 ntTSL 4 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 ZNF736P2Y-201ENST00000416040 1279 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL121904.1-202ENST00000416638 656 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC006366.1-201ENST00000422002 759 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL022331.1-201ENST00000429025 477 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL365220.1-201ENST00000432923 399 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 UBE2L5P-201ENST00000436446 465 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL353804.1-201ENST00000444482 451 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 NDUFAF4P2-201ENST00000445374 520 ntBASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC112495.1-201ENST00000456037 756 ntTSL 5 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 IQCJ-SCHIP1-AS1-201ENST00000460574 508 ntTSL 3 BASIC6.1□□□□□ -1.43
CDK5RAP1Q96SZ6 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.1□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 222.8 ms