Protein–RNA interactions for Protein: Q96JG6

VPS50, Syndetin, humanhuman

Predictions only

Length 964 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50Q96JG6 AL357562.1-201ENST00000624911 609 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 CRNDE-213ENST00000635991 546 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 UGP2-232ENST00000640075 567 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 MFSD8-213ENST00000641134 1327 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 CASC19-248ENST00000641674 1356 ntBASIC5.61□□□□□ -1.51
VPS50Q96JG6 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 AC019197.1-201ENST00000638199 3611 ntTSL 5 BASIC5.61□□□□□ -1.51
VPS50Q96JG6 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC5.61□□□□□ -1.51
VPS50Q96JG6 PDE5A-203ENST00000394439 6770 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 ESCO1-204ENST00000622333 1850 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 ARPP19-208ENST00000566423 5362 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 IBTK-206ENST00000503631 3560 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 TNFSF4-202ENST00000367718 3429 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 NLRP11-201ENST00000589093 3417 ntAPPRIS P2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 TRPC4-203ENST00000358477 2955 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 UBE3A-203ENST00000428984 2986 ntAPPRIS P3 TSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC079915.1-201ENST00000584382 2780 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 NEPNP-201ENST00000404786 1371 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 ZNF701-202ENST00000391785 2634 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC007382.1-201ENST00000624376 2618 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 MECOM-217ENST00000494292 3939 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 MGST1-201ENST00000010404 901 ntAPPRIS P1 TSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 OR6K2-201ENST00000359610 975 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 MIR375-201ENST00000362103 64 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 RN7SKP74-201ENST00000362849 309 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 U3.7-201ENST00000363668 216 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 RNU1-146P-201ENST00000364015 165 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 KRTAP29-1-201ENST00000391353 1026 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 MGST1-203ENST00000396207 909 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 OR7E101P-201ENST00000400428 513 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 CEACAM7-202ENST00000401731 1236 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 ZNF602P-201ENST00000405929 924 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 RN7SKP206-201ENST00000410823 293 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 OR51B3P-201ENST00000412287 913 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 UBE2V1P9-201ENST00000414760 368 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 GPC5-AS2-201ENST00000417589 401 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC104389.1-201ENST00000418080 522 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 RPL34P3-201ENST00000421454 338 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 RAB3GAP1-202ENST00000425393 1139 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 HSPE1P16-201ENST00000426640 348 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 TSSK4-203ENST00000428351 576 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC126120.1-201ENST00000431082 470 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC005208.1-201ENST00000435112 599 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 MTCYBP29-201ENST00000436327 1006 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 MTCO1P53-201ENST00000441633 699 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 HMGB1P5-202ENST00000451497 985 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AL023584.2-201ENST00000454411 444 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC104164.1-201ENST00000460282 590 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 RN7SL57P-201ENST00000493687 290 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 PRB1-202ENST00000500254 775 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC139720.1-201ENST00000509497 512 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC008780.2-201ENST00000509844 820 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC106894.1-201ENST00000511735 451 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC098869.2-201ENST00000514187 862 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 RN7SKP287-201ENST00000516546 266 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 SNORA70.20-201ENST00000516848 126 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 MAL2-205ENST00000521048 575 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC078899.1-201ENST00000521432 1185 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 ARL6IP1P3-201ENST00000524544 560 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 EIF4A2P5-201ENST00000529914 499 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 EQTN-204ENST00000537675 879 ntAPPRIS ALT2 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AAGAB-203ENST00000542650 1015 ntTSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC110023.1-201ENST00000554318 457 ntTSL 3 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 SLC7A7-210ENST00000554517 1158 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC010735.1-201ENST00000567305 1026 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 SNORD39.2-201ENST00000579995 76 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 RN7SL753P-201ENST00000581238 290 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AL354733.2-210ENST00000586211 647 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC119403.2-201ENST00000590960 598 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 LINC01125-220ENST00000599501 965 ntAPPRIS ALT2 TSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC007193.1-201ENST00000599645 448 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 SUMO2P14-201ENST00000604488 293 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC093424.1-201ENST00000604999 338 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 RNU4-5P-201ENST00000607255 135 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AL133481.2-203ENST00000607558 139 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 MIR6809-201ENST00000612189 116 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 AC079395.3-201ENST00000615161 484 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 Metazoa_SRP.130-201ENST00000622625 267 ntBASIC5.6□□□□□ -1.51
VPS50Q96JG6 OR4A15-202ENST00000641526 945 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 OR5AN1-203ENST00000641998 7647 ntAPPRIS P1 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 EMSY-206ENST00000525038 4376 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 SLC26A7-208ENST00000523719 2902 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 CACNB4-221ENST00000636130 7748 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 FAM72A-201ENST00000341209 1774 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC5.6□□□□□ -1.51
VPS50Q96JG6 SLC12A1-205ENST00000558405 3426 ntAPPRIS P3 TSL 1 (best) BASIC5.6□□□□□ -1.51
VPS50Q96JG6 RNF145-201ENST00000274542 3364 ntTSL 2 BASIC5.59□□□□□ -1.51
VPS50Q96JG6 RGS1-201ENST00000367459 1405 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 SLC1A3-201ENST00000265113 4170 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
VPS50Q96JG6 GNG2-212ENST00000556752 3424 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 108.4 ms