Protein–RNA interactions for Protein: Q96DC8

ECHDC3, Enoyl-CoA hydratase domain-containing protein 3, mitochondrial, humanhuman

Predictions only

Length 303 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC3Q96DC8 SNORA51.8-201ENST00000384234 132 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 RPL21P67-201ENST00000402896 478 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 LINC01661-201ENST00000415910 708 ntTSL 3 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 IGKV1OR9-1-201ENST00000424370 284 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AL034405.1-201ENST00000432062 526 ntTSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 NIFKP7-201ENST00000503365 834 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AL671862.1-201ENST00000515851 349 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AP000859.1-201ENST00000525536 307 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 OR5D15P-201ENST00000531671 942 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AC066612.1-202ENST00000561094 518 ntTSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AC116553.2-201ENST00000564203 463 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 OR1F2P-201ENST00000570470 933 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 EIF1P5-201ENST00000585002 234 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AC024075.3-201ENST00000601687 453 ntTSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AL356752.1-201ENST00000615844 593 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 AF117829.2-201ENST00000619538 361 ntBASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 C2orf83-206ENST00000642055 453 ntAPPRIS P3 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 A1CF-205ENST00000374001 9221 ntAPPRIS ALT1 TSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 CTAGE5-210ENST00000553728 4392 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 ZFP14-201ENST00000270001 7489 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 TAX1BP1-203ENST00000409980 2629 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 IL13RA2-201ENST00000243213 1371 ntAPPRIS P1 TSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 TGFBR1-208ENST00000550253 1538 ntTSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 PDE7A-201ENST00000379419 2425 ntAPPRIS P3 TSL 2 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 MYO3A-203ENST00000376302 2723 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 GRID2-208ENST00000611049 4844 ntTSL 1 (best) BASIC5.02□□□□□ -1.61
ECHDC3Q96DC8 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 FRYL-209ENST00000506685 1940 ntTSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 MTHFD2L-201ENST00000325278 2300 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 SCN2A-201ENST00000283256 8660 ntAPPRIS P5 TSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 ARHGAP18-201ENST00000368149 4462 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 TJP1-209ENST00000545208 5007 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 ECM1P2-201ENST00000503354 1577 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 SETP15-201ENST00000412724 337 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 SMC4P1-201ENST00000414479 527 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AF186996.5-201ENST00000418098 904 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 OR2AM1P-201ENST00000422137 422 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AL691482.1-201ENST00000453255 87 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC096543.1-201ENST00000455038 823 ntTSL 3 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC021660.1-201ENST00000465006 554 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 SLC9A9-AS1-201ENST00000479030 518 ntTSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 RN7SL319P-201ENST00000480656 221 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 NECTIN3-AS1-205ENST00000491709 792 ntTSL 3 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 ENPP7P11-201ENST00000505915 627 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 PYM1-205ENST00000547925 499 ntTSL 3 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AL359219.2-201ENST00000555184 348 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 TVP23CP2-201ENST00000571473 623 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC011487.3-201ENST00000593607 453 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC087385.3-201ENST00000620477 187 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC074140.1-201ENST00000621617 208 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AL353662.3-201ENST00000625131 237 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 FRG1EP-201ENST00000634469 770 ntBASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 OR8J3-204ENST00000642058 3806 ntAPPRIS P1 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 C5orf42-201ENST00000425232 11199 ntAPPRIS P2 TSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 C2CD6-202ENST00000439140 5512 ntAPPRIS ALT2 TSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 GABRG2-224ENST00000640574 3150 ntTSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 TRPC4-205ENST00000379679 2475 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 AC010127.1-209ENST00000447809 2305 ntTSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 ROS1-201ENST00000368507 7417 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 TTC3-204ENST00000399017 10363 ntAPPRIS P1 TSL 1 (best) BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC5.01□□□□□ -1.61
ECHDC3Q96DC8 MID2-202ENST00000443968 2251 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 PWRN2-202ENST00000567246 4295 ntTSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AL929601.4-201ENST00000613011 1341 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC112198.2-201ENST00000426589 6996 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 UACA-211ENST00000560441 4723 ntAPPRIS ALT2 TSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AL031595.2-201ENST00000624215 19071 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 SNORA70.10-201ENST00000384515 134 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 MIR550A3-201ENST00000390735 95 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AL021331.1-201ENST00000402817 582 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 SNORA79B-201ENST00000410557 148 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 SETP10-201ENST00000424368 814 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AL590762.4-201ENST00000425885 253 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AL161630.1-201ENST00000450938 1299 ntTSL 1 (best) BASIC5□□□□□ -1.61
ECHDC3Q96DC8 LINC01767-201ENST00000451914 545 ntTSL 2 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC115618.2-201ENST00000453810 450 ntTSL 3 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 AL035446.1-201ENST00000455011 453 ntTSL 5 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 MYL12BP2-201ENST00000503948 512 ntBASIC5□□□□□ -1.61
ECHDC3Q96DC8 AC084871.1-201ENST00000508020 628 ntTSL 3 BASIC5□□□□□ -1.61
ECHDC3Q96DC8 LINC02265-201ENST00000510551 957 ntTSL 2 BASIC5□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms