Protein–RNA interactions for Protein: Q8WYN0

ATG4A, Cysteine protease ATG4A, humanhuman

Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4AQ8WYN0 OARD1-211ENST00000480585 829 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC026414.1-201ENST00000504046 698 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC097478.1-204ENST00000509723 547 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 PLAC8-205ENST00000509973 489 ntTSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 HMGN1P9-201ENST00000515212 298 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 SCARNA20.4-201ENST00000516969 131 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC092709.1-201ENST00000521355 1045 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC022874.1-201ENST00000526382 550 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AP001992.1-201ENST00000533875 723 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 ASB8-215ENST00000540782 659 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC084756.1-201ENST00000558237 606 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC012170.3-201ENST00000560159 297 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC093524.1-201ENST00000564266 1094 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 PWRN1-204ENST00000565241 480 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC104996.1-201ENST00000583250 591 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC008536.1-201ENST00000602872 669 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 Z82195.1-201ENST00000604558 398 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC084782.3-201ENST00000612282 578 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 PRKCQ-AS1-213ENST00000613985 883 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 Six3os1_2.1-201ENST00000616963 217 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC022079.2-201ENST00000619739 566 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AL513314.2-201ENST00000621440 545 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC129778.1-202ENST00000623812 261 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AL591379.1-207ENST00000635982 261 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AMYH02020865.1-205ENST00000636189 261 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 OR13C3-202ENST00000641090 1108 ntAPPRIS P1 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC073869.8-201ENST00000641806 335 ntBASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AHCTF1-201ENST00000326225 8633 ntAPPRIS P2 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 ATXN2-202ENST00000389153 3854 ntAPPRIS ALT2 TSL 5 BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 EXPH5-201ENST00000265843 10187 ntAPPRIS P3 TSL 1 (best) BASIC5.68□□□□□ -1.5
ATG4AQ8WYN0 AC012321.1-201ENST00000561622 1588 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 KARSP1-201ENST00000451871 1752 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AL078595.2-201ENST00000605309 1780 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 MFAP1-201ENST00000267812 2155 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 OFD1P6Y-201ENST00000432335 1637 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 TTTY9B-201ENST00000433794 1637 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 LINC01923-203ENST00000456248 2528 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 FDCSP-201ENST00000317987 566 ntAPPRIS P1 TSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 ASXL1-203ENST00000375689 812 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 TOMM7-203ENST00000405021 455 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 ATF1P1-201ENST00000406040 927 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 LIPT1P1-201ENST00000415870 1186 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 GPC5-IT1-201ENST00000416664 658 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 LINC00845-201ENST00000417931 696 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 RPS26P13-201ENST00000419030 330 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 EIF4A1P1-201ENST00000420241 934 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 VTI1BP4-201ENST00000427516 527 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 LINC00894-203ENST00000432696 298 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 RPL7P34-201ENST00000433316 712 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 BMS1P22-202ENST00000440946 1160 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AL121917.1-201ENST00000441270 893 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 MTND2P22-201ENST00000444325 1033 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC006019.3-201ENST00000446335 698 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AP006222.1-205ENST00000450734 457 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 CYCSP42-201ENST00000450823 238 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 OR52E7P-201ENST00000452394 933 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 VDAC2P4-201ENST00000452925 711 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 OFD1P7Y-201ENST00000454643 1155 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 TRBV2-201ENST00000455382 421 ntAPPRIS P1 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC008280.2-201ENST00000455473 307 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 RABGAP1L-214ENST00000478442 648 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 RPL37P23-201ENST00000492641 294 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC092666.1-203ENST00000495144 698 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC082651.2-201ENST00000496833 166 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC113420.1-201ENST00000507903 571 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 ZNF131-215ENST00000509931 970 ntTSL 2 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AL049544.1-201ENST00000511849 673 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 RNA5SP473-201ENST00000516402 125 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 TRIM77BP-201ENST00000524985 1119 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 PDZD9-203ENST00000537222 1068 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC090503.1-201ENST00000548029 729 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC006504.5-212ENST00000587188 746 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC097717.1-230ENST00000597051 738 ntTSL 3 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AL583832.1-201ENST00000603227 784 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AL359513.1-201ENST00000614364 557 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC231759.1-201ENST00000616455 597 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC021755.4-201ENST00000616620 456 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 U6.48-201ENST00000618523 106 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AP003485.2-201ENST00000623636 610 ntBASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 AC125613.1-204ENST00000636224 1248 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 PFKFB2-201ENST00000367079 3494 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 TNFSF11-202ENST00000358545 1520 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 DTNA-231ENST00000598774 2418 ntTSL 1 (best) BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 EIF3E-206ENST00000519030 1324 ntTSL 5 BASIC5.67□□□□□ -1.5
ATG4AQ8WYN0 GABRA1-218ENST00000637827 1838 ntAPPRIS P1 TSL 5 BASIC5.67□□□□□ -1.5
Retrieved 100 of 98,524 protein–RNA pairs in 85.2 ms