Protein–RNA interactions for Protein: Q8NHS4

CLHC1, Clathrin heavy chain linker domain-containing protein 1, humanhuman

Predictions only

Length 586 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLHC1Q8NHS4 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLHC1Q8NHS4 CLSPN-203ENST00000373220 3977 ntAPPRIS ALT2 TSL 1 (best) BASIC4.87□□□□□ -1.63
CLHC1Q8NHS4 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC4.87□□□□□ -1.63
CLHC1Q8NHS4 TRAT1-202ENST00000426646 1596 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLHC1Q8NHS4 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CLHC1Q8NHS4 AC011493.1-201ENST00000596753 1632 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AL672167.1-204ENST00000641875 3017 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 KLHL13-201ENST00000262820 3972 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 RIF1-203ENST00000428287 7722 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 ITGB3BP-201ENST00000271002 948 ntAPPRIS P3 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC017079.1-201ENST00000333650 415 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 NCSTNP1-201ENST00000406229 144 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC073136.2-201ENST00000417282 849 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 BX323845.1-201ENST00000432417 179 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AL050338.1-201ENST00000445585 786 ntTSL 3 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 MRPL35P2-201ENST00000448009 511 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC093166.2-201ENST00000455969 1017 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 RN7SL346P-201ENST00000491561 294 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 SUCLG2-AS1-203ENST00000496640 862 ntTSL 5 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 SSX6-203ENST00000509958 336 ntTSL 3 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 snoU109.6-201ENST00000516831 118 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC105031.1-201ENST00000518550 476 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC134349.2-201ENST00000535136 910 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 RPLP0-225ENST00000552292 720 ntTSL 2 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC087477.4-201ENST00000560586 542 ntTSL 4 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC107926.1-201ENST00000581673 621 ntTSL 3 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC022154.1-203ENST00000594850 493 ntTSL 3 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AL513314.2-204ENST00000619187 459 ntTSL 5 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 BX005214.3-202ENST00000619809 325 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC026124.2-201ENST00000621847 656 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC015908.5-201ENST00000623289 343 ntBASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 LPAR4-205ENST00000614823 2155 ntAPPRIS P1 TSL 4 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 FAM26D-201ENST00000368596 1353 ntAPPRIS P1 TSL 5 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 AC099811.1-201ENST00000597755 1496 ntTSL 3 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 ANKRD30A-204ENST00000602533 4458 ntAPPRIS ALT2 TSL 5 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 MTERF1-202ENST00000406735 1639 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CLHC1Q8NHS4 OMG-201ENST00000247271 1947 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC093535.2-201ENST00000624769 2326 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 MPDZ-204ENST00000381022 7589 ntAPPRIS ALT2 TSL 5 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 ZNF12-203ENST00000404360 4474 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 MYO9A-209ENST00000564571 8111 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 OR9G1-202ENST00000642097 3611 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 DEFB4B-201ENST00000318157 332 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 OR5H1-201ENST00000354565 942 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 U3.2-201ENST00000362981 210 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 TEX35-202ENST00000367639 785 ntAPPRIS ALT2 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 OR6C1-201ENST00000379668 1064 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 MIR1182-201ENST00000408363 97 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 SNORA81-201ENST00000408493 178 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 OR5M12P-201ENST00000423388 929 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC108075.1-201ENST00000424692 529 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC099060.1-201ENST00000427806 448 ntTSL 3 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 COX6CP13-201ENST00000428703 226 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 STXBP5-AS1-204ENST00000431143 644 ntTSL 3 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC015923.1-201ENST00000435892 305 ntTSL 2 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AL732323.1-201ENST00000445897 456 ntTSL 3 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC144530.1-201ENST00000452862 555 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AL356981.1-201ENST00000454879 684 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 SETP20-201ENST00000457046 852 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 RNA5SP103-201ENST00000459503 118 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 RN7SL443P-201ENST00000464331 290 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC009127.1-201ENST00000467090 155 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC087664.1-201ENST00000521456 358 ntTSL 3 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 HDAC2-AS2-217ENST00000523087 493 ntTSL 3 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 SMARCE1P3-201ENST00000553649 1231 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC129507.1-204ENST00000573601 503 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC090457.1-201ENST00000579775 211 ntTSL 3 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC006504.5-201ENST00000588122 655 ntTSL 5 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 FKBP1AP1-201ENST00000594588 318 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 RPSAP73-201ENST00000614820 330 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 WBP1LP8-201ENST00000617401 327 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 LINC01232-203ENST00000625369 576 ntTSL 4 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 LINC01708-202ENST00000634316 859 ntTSL 5 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC000374.1-201ENST00000434698 1745 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AP001642.1-201ENST00000624727 2117 ntBASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 AC099792.1-203ENST00000634701 2183 ntTSL 5 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 IQGAP2-203ENST00000396234 3376 ntTSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 SEC31A-201ENST00000264405 3447 ntTSL 2 BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.85□□□□□ -1.63
CLHC1Q8NHS4 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.84□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms