Protein–RNA interactions for Protein: Q8NET4

RTL9, Retrotransposon Gag-like protein 9, humanhuman

Predictions only

Length 1,388 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTL9Q8NET4 AIMP1-202ENST00000394701 2586 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 LINC02352-202ENST00000559292 1450 ntTSL 5 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 PRTG-201ENST00000389286 11967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 MMRN1-201ENST00000264790 4967 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 ZNF678-201ENST00000343776 8556 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 LCLAT1-203ENST00000379509 4888 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 LIMA1-203ENST00000547825 3920 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 PAPOLA-202ENST00000392990 2588 ntTSL 5 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 DNAJC12-201ENST00000225171 1201 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 FAM3C2-201ENST00000312214 681 ntBASIC6.12□□□□□ -1.43
RTL9Q8NET4 FHIT-201ENST00000341848 174 ntTSL 3 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 KRTAP21-3-201ENST00000444335 253 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 AL691482.1-201ENST00000453255 87 ntBASIC6.12□□□□□ -1.43
RTL9Q8NET4 AC105177.1-201ENST00000523110 555 ntTSL 4 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 AF117829.1-210ENST00000523859 696 ntTSL 3 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 ANP32E-205ENST00000533654 908 ntTSL 2 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 AC116553.2-201ENST00000564203 463 ntBASIC6.12□□□□□ -1.43
RTL9Q8NET4 AC093524.1-201ENST00000564266 1094 ntBASIC6.12□□□□□ -1.43
RTL9Q8NET4 OR1S2-202ENST00000641683 941 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 N4BP2L2-204ENST00000399396 2872 ntTSL 5 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 PROX1-205ENST00000498508 8498 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 ELAVL4-205ENST00000371824 3966 ntAPPRIS P5 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 TRIM36-209ENST00000514154 1952 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 CEP162-207ENST00000617909 5095 ntTSL 5 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC6.12□□□□□ -1.43
RTL9Q8NET4 PTK2-213ENST00000519465 3279 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
RTL9Q8NET4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 ADAM24P-201ENST00000398655 2101 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 MECOM-202ENST00000433243 3508 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AP001029.2-203ENST00000589795 4910 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 TMED2-203ENST00000509052 1975 ntTSL 2 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 C1orf54-201ENST00000369098 418 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 LST1-207ENST00000376092 285 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 RNA5SP345-201ENST00000410646 108 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC114755.2-201ENST00000413520 361 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 CYCSP11-201ENST00000436426 315 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 AL606490.8-201ENST00000441624 319 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 PRPF38AP1-201ENST00000451976 933 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 AL354771.1-201ENST00000452178 602 ntTSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 NDUFAF4P3-201ENST00000456468 525 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 RBPMS-207ENST00000519647 780 ntTSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC009884.1-201ENST00000522670 545 ntTSL 4 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC090518.1-202ENST00000568246 578 ntTSL 4 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 NUFIP2-202ENST00000579665 559 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC005899.1-201ENST00000584125 563 ntTSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 RPL26P30-202ENST00000602923 645 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC009704.2-201ENST00000618739 483 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC026367.3-201ENST00000619032 590 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 XRN1-201ENST00000264951 10143 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 RPGRIP1L-212ENST00000621565 6038 ntAPPRIS ALT1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 LINC00989-201ENST00000508174 2080 ntTSL 3 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 C1orf112-201ENST00000286031 4355 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 KMT2D-201ENST00000301067 19419 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 PLEKHS1-204ENST00000369310 2046 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
RTL9Q8NET4 AC010928.1-201ENST00000592477 1447 ntBASIC6.11□□□□□ -1.43
RTL9Q8NET4 ASXL3-201ENST00000269197 11399 ntAPPRIS P2 TSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 PRUNE2-207ENST00000428286 12437 ntTSL 5 BASIC6.11□□□□□ -1.43
RTL9Q8NET4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.1□□□□□ -1.43
RTL9Q8NET4 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 LINC00550-201ENST00000629293 3434 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTL9Q8NET4 CD84-208ENST00000534968 7885 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTL9Q8NET4 CFI-202ENST00000394635 2053 ntAPPRIS ALT2 TSL 2 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 U3.30-201ENST00000391308 210 ntBASIC6.1□□□□□ -1.43
RTL9Q8NET4 AC079809.1-201ENST00000415468 276 ntBASIC6.1□□□□□ -1.43
RTL9Q8NET4 AL121885.1-201ENST00000417957 451 ntTSL 3 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 AL606970.4-201ENST00000424343 455 ntTSL 2 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 AL031767.1-201ENST00000426374 386 ntTSL 5 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 NRBF2P3-201ENST00000432731 865 ntBASIC6.1□□□□□ -1.43
RTL9Q8NET4 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 AP000402.1-201ENST00000446404 540 ntTSL 3 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 AC111000.3-201ENST00000508057 576 ntBASIC6.1□□□□□ -1.43
RTL9Q8NET4 MAL2-201ENST00000522112 573 ntTSL 4 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 ATP5J2P6-201ENST00000565203 266 ntBASIC6.1□□□□□ -1.43
RTL9Q8NET4 AC087500.2-201ENST00000575056 498 ntTSL 5 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 AL583832.1-201ENST00000603227 784 ntBASIC6.1□□□□□ -1.43
RTL9Q8NET4 OR10A6-202ENST00000623991 945 ntAPPRIS P1 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 MAP2-205ENST00000392194 5303 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTL9Q8NET4 SCN2A-207ENST00000631182 8430 ntAPPRIS ALT1 TSL 5 BASIC6.1□□□□□ -1.43
RTL9Q8NET4 AC099329.2-203ENST00000471537 3605 ntTSL 1 (best) BASIC6.1□□□□□ -1.43
RTL9Q8NET4 SMG1P6-201ENST00000532337 2930 ntBASIC6.1□□□□□ -1.43
RTL9Q8NET4 LIMA1-212ENST00000552491 2652 ntAPPRIS ALT2 TSL 2 BASIC6.09□□□□□ -1.43
RTL9Q8NET4 API5-210ENST00000534600 1760 ntTSL 5 BASIC6.09□□□□□ -1.43
RTL9Q8NET4 UQCRC2P1-201ENST00000417777 1332 ntBASIC6.09□□□□□ -1.43
RTL9Q8NET4 AP005432.1-201ENST00000580891 3485 ntBASIC6.09□□□□□ -1.43
RTL9Q8NET4 FAM35A-202ENST00000298786 3614 ntTSL 5 BASIC6.09□□□□□ -1.43
RTL9Q8NET4 ARL4A-205ENST00000404894 840 ntAPPRIS P1 TSL 2 BASIC6.09□□□□□ -1.43
RTL9Q8NET4 RN7SKP16-201ENST00000410180 299 ntBASIC6.09□□□□□ -1.43
RTL9Q8NET4 RSU1P3-201ENST00000412878 835 ntBASIC6.09□□□□□ -1.43
RTL9Q8NET4 AC068483.1-201ENST00000413403 660 ntTSL 3 BASIC6.09□□□□□ -1.43
RTL9Q8NET4 C6orf52-203ENST00000426700 493 ntAPPRIS P2 TSL 2 BASIC6.09□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms