Protein–RNA interactions for Protein: Q8NEF3

CCDC112, Coiled-coil domain-containing protein 112, humanhuman

Predictions only

Length 446 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC112Q8NEF3 ARID2-205ENST00000444670 7316 ntTSL 1 (best) BASIC5.51□□□□□ -1.53
CCDC112Q8NEF3 AC000123.3-201ENST00000624029 4975 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 LINC02476-201ENST00000426413 1577 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 CR383656.5-201ENST00000547616 1340 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AL359922.3-201ENST00000624779 1670 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 HYAL4-202ENST00000476325 1616 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AL355306.2-205ENST00000635395 1646 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 EFCAB9-201ENST00000398186 702 ntAPPRIS P1 TSL 3 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 FABP7P1-201ENST00000424004 391 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 EIF4HP2-201ENST00000424380 563 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 TXNP5-201ENST00000441043 315 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 ARL4AP3-201ENST00000441452 574 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AC073587.1-201ENST00000447093 876 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 IMMP2L-205ENST00000450877 761 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 RN7SL51P-201ENST00000468230 285 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 RN7SL184P-201ENST00000488308 297 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 DEFB109F-201ENST00000491870 277 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 SUMO2P4-201ENST00000504193 276 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 RPEP1-201ENST00000504507 658 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AC005823.2-201ENST00000505978 650 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 LINC02465-204ENST00000514892 481 ntTSL 2 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 OR7G1-201ENST00000541538 936 ntAPPRIS P1 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AC091231.1-201ENST00000558443 391 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 RBM22P1-201ENST00000578589 1214 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 RN7SL176P-201ENST00000580352 264 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AC004596.1-201ENST00000586560 528 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AC011451.1-201ENST00000591336 405 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AL008635.1-201ENST00000609073 385 ntTSL 3 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 LINC01685-203ENST00000634464 1201 ntTSL 5 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AC074101.1-201ENST00000637861 241 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 AL672167.1-203ENST00000641299 2975 ntBASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 TRIQK-206ENST00000518748 3563 ntAPPRIS P1 TSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 TES-202ENST00000393481 2763 ntTSL 1 (best) BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC5.5□□□□□ -1.53
CCDC112Q8NEF3 DDX18P5-201ENST00000534547 1306 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 EEF1A1P42-201ENST00000613436 1331 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 FAM133A-202ENST00000332647 3159 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 HSPA8P18-201ENST00000439846 1928 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 DOPEY1-202ENST00000349129 8210 ntAPPRIS P3 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 SNORA73.1-201ENST00000363107 205 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 C1orf194-203ENST00000369948 663 ntAPPRIS P1 TSL 2 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AMELX-202ENST00000380712 835 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AMELX-203ENST00000380714 793 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 MIR1286-201ENST00000408112 78 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 TFPI-204ENST00000409676 1119 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 NT5C3A-206ENST00000409787 840 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 LINC01829-201ENST00000414404 571 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC093158.1-201ENST00000415549 791 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 CYCSP10-201ENST00000417973 294 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 MAGI2-AS3-204ENST00000426835 738 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 FTLP19-201ENST00000433300 394 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 RPS26P2-201ENST00000440331 348 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 RPL5P16-201ENST00000471467 790 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC100832.1-201ENST00000471945 383 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 ATG10-208ENST00000513634 618 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 RNU6-964P-201ENST00000516524 69 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC012464.2-201ENST00000551257 779 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC011270.1-201ENST00000558606 583 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC006504.7-201ENST00000592806 924 ntTSL 3 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC233280.2-201ENST00000603917 1070 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC087283.1-201ENST00000604029 1074 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AL121890.2-201ENST00000617644 465 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC008115.4-201ENST00000619780 775 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 ST6GALNAC3-203ENST00000621530 617 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 MIR8080-201ENST00000622224 89 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC063952.1-204ENST00000635496 927 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 PDE4D-229ENST00000638939 375 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 SAMMSON-209ENST00000641222 1100 ntBASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 MS4A1-202ENST00000389939 3372 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 FGD4-210ENST00000525053 2925 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 DLD-204ENST00000437604 1859 ntTSL 2 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AMD1-204ENST00000368885 3438 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 N4BP2L2-201ENST00000267068 9427 ntAPPRIS P1 TSL 1 (best) BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 SPART-201ENST00000355182 4820 ntAPPRIS P1 TSL 5 BASIC5.49□□□□□ -1.53
CCDC112Q8NEF3 AC087667.1-201ENST00000500180 1422 ntTSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 CSRNP3-201ENST00000314499 11788 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 MIPEPP2-201ENST00000422560 1819 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 SPINK5-201ENST00000256084 3535 ntAPPRIS P3 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 GHR-209ENST00000612626 4524 ntAPPRIS P1 TSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 OR56A1-203ENST00000641900 8448 ntAPPRIS P1 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 ANKRD30A-201ENST00000361713 4405 ntAPPRIS P2 TSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AC008549.2-201ENST00000333482 706 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 RNU1-94P-201ENST00000362627 173 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 BPHL-201ENST00000380368 797 ntTSL 5 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 SNORD96B-201ENST00000386148 79 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 AF240627.1-201ENST00000416002 879 ntTSL 3 BASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 QRSL1P2-201ENST00000418582 964 ntBASIC5.48□□□□□ -1.53
CCDC112Q8NEF3 NPM1P22-201ENST00000427761 952 ntBASIC5.48□□□□□ -1.53
Retrieved 100 of 98,524 protein–RNA pairs in 95.8 ms