Protein–RNA interactions for Protein: Q68DV7

RNF43, E3 ubiquitin-protein ligase RNF43, humanhuman

Predictions only

Length 783 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF43Q68DV7 RNY3P10-201ENST00000384764 102 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 TRAV19-201ENST00000390447 467 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 RNU6-1009P-201ENST00000390996 107 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AP003170.5-201ENST00000397185 335 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 RNA5SP431-201ENST00000410312 120 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 EEF1A1P40-201ENST00000412883 573 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 LINC01393-201ENST00000419905 746 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 LINC02020-202ENST00000421006 575 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AL354977.2-201ENST00000430387 728 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 BTF3P10-201ENST00000433415 495 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 ARMC4P1-201ENST00000438905 707 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 SNRPBP1-201ENST00000443634 282 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AL360091.2-201ENST00000446847 650 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 PAXBP1P1-201ENST00000449315 447 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 DCUN1D1-204ENST00000469954 970 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 GAPDHP36-201ENST00000480688 918 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC117395.1-201ENST00000487390 403 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC084024.2-201ENST00000503480 791 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC112484.3-201ENST00000505910 329 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC011411.1-201ENST00000509592 876 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC018797.1-201ENST00000510791 255 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 LINC02482-202ENST00000515205 422 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 HNRNPKP5-201ENST00000515300 253 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 GTF2H1-208ENST00000526630 932 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 TRIM69-208ENST00000560442 1262 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AP003115.1-201ENST00000569849 463 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 OR1E3-201ENST00000575608 948 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 PPIAL4A-201ENST00000577856 660 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 RN7SL199P-201ENST00000578752 281 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 RN7SL656P-201ENST00000579044 281 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 RN7SL404P-201ENST00000582421 281 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC243756.1-201ENST00000584068 660 ntAPPRIS P1 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 SLC14A2-AS1-203ENST00000592286 528 ntTSL 4 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC010680.3-201ENST00000604215 520 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AL365503.1-201ENST00000605247 905 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC092902.3-201ENST00000610060 373 ntTSL 3 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AL589743.7-201ENST00000612637 233 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 MIR6721-201ENST00000617181 87 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 FRG1KP-201ENST00000623592 341 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 TTN-AS1-263ENST00000627527 784 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AC215522.3-201ENST00000635602 354 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 ZNRD1ASP-221ENST00000637794 1074 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 AD000090.1-201ENST00000638356 494 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 PPFIA2-203ENST00000443686 3782 ntTSL 2 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 ABLIM1-202ENST00000369252 7690 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 CACNA1E-202ENST00000358338 14700 ntAPPRIS ALT2 TSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 AP004289.1-201ENST00000436307 2205 ntBASIC6.88□□□□□ -1.31
RNF43Q68DV7 BICRAL-202ENST00000394168 6515 ntAPPRIS P1 TSL 1 (best) BASIC6.88□□□□□ -1.31
RNF43Q68DV7 MECOM-209ENST00000472280 3593 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 FBXO3-213ENST00000534136 3217 ntTSL 5 BASIC6.88□□□□□ -1.31
RNF43Q68DV7 DMD-222ENST00000474231 5209 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 SLC25A40-201ENST00000341119 4045 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC244100.3-202ENST00000617328 1721 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 DPY19L1P1-201ENST00000417811 2594 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 MDM2-201ENST00000258148 1361 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 LRRC39-202ENST00000370137 1396 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 STIL-203ENST00000371877 5009 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 EEF1A1P30-201ENST00000429708 1315 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 USP16-201ENST00000334352 3004 ntAPPRIS P3 TSL 5 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 SORBS1-205ENST00000371227 7279 ntAPPRIS ALT2 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 IL6STP1-201ENST00000346911 1020 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 OR11H13P-201ENST00000359695 979 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 RNA5SP279-201ENST00000365513 117 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 TINAG-203ENST00000370869 782 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 SNORA70.9-201ENST00000384370 135 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 AL359694.1-201ENST00000403247 604 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 RNA5SP251-201ENST00000410614 137 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC096559.1-201ENST00000414086 399 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 AL139413.1-201ENST00000421309 217 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 AL022400.1-201ENST00000423946 935 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 TMEM246-AS1-202ENST00000425734 466 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC009784.1-201ENST00000426484 460 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC239367.3-201ENST00000428996 814 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 LIX1L-AS1-205ENST00000437797 536 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 DIAPH2-AS1-201ENST00000439759 971 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 DNAJC19P4-201ENST00000440115 345 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC016903.1-201ENST00000444017 588 ntTSL 4 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 AL139121.1-201ENST00000445647 244 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 LINC01952-202ENST00000450016 281 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 RPL36AP33-201ENST00000450395 310 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 CYCSP42-201ENST00000450823 238 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 ATP5A1P7-201ENST00000453978 1279 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 GTF2IP12-201ENST00000456547 356 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC096554.1-201ENST00000458182 529 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 RPSAP37-201ENST00000470913 821 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 AC007003.1-201ENST00000472463 736 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 RN7SL382P-201ENST00000482631 282 ntBASIC6.87□□□□□ -1.31
RNF43Q68DV7 SCG5-207ENST00000497208 949 ntTSL 5 BASIC6.87□□□□□ -1.31
RNF43Q68DV7 LINC00483-204ENST00000502517 940 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
RNF43Q68DV7 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC6.87□□□□□ -1.31
Retrieved 100 of 98,524 protein–RNA pairs in 105.8 ms