Protein–RNA interactions for Protein: Q5VTB9

RNF220, E3 ubiquitin-protein ligase RNF220, humanhuman

Predictions only

Length 566 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF220Q5VTB9 TAS2R15P-201ENST00000390674 928 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AF228730.1-201ENST00000397972 663 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 IL6-203ENST00000401651 539 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RNA5SP198-201ENST00000410376 127 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RN7SKP166-201ENST00000410812 305 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 MS4A6A-202ENST00000420732 863 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 HIGD1AP12-201ENST00000427832 281 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC084290.1-201ENST00000434995 374 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC108051.1-201ENST00000435291 549 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC064862.5-201ENST00000440618 334 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 EEF1A1P39-201ENST00000440791 250 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 SMIM30-204ENST00000441359 962 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AL645936.1-201ENST00000441979 518 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 FHP1-201ENST00000442741 703 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AL512593.1-201ENST00000444758 779 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC112492.1-201ENST00000449607 712 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 KCNMB2-AS1-205ENST00000451742 844 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC073409.1-201ENST00000451749 269 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC099344.3-201ENST00000454489 626 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC099670.1-201ENST00000455141 783 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RPS7P10-201ENST00000464254 603 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC073522.1-201ENST00000483312 377 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RPS3AP15-201ENST00000483874 781 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 LINC01322-202ENST00000494915 594 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC105233.1-201ENST00000498840 781 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC034223.2-201ENST00000511840 425 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC112673.1-201ENST00000513168 575 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC098829.1-202ENST00000513384 537 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RPS27AP18-201ENST00000515536 459 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RNU6-513P-201ENST00000516104 104 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RNA5SP434-201ENST00000516647 121 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC040970.1-202ENST00000517908 505 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AZIN1-AS1-208ENST00000519257 619 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 BAALC-AS1-205ENST00000521102 613 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 TPM3P3-201ENST00000521343 354 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AP000842.2-202ENST00000526211 569 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC011611.4-201ENST00000547721 779 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC092132.1-201ENST00000570859 352 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 TTC39C-AS1-201ENST00000579713 817 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC090312.2-201ENST00000582687 378 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC011476.3-202ENST00000586845 553 ntTSL 3 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AL583856.2-201ENST00000606298 543 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC022106.1-201ENST00000612834 766 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 RN7SL261P-201ENST00000613441 282 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC005899.6-201ENST00000620729 297 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC016717.3-201ENST00000624730 554 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AC092608.3-201ENST00000625017 386 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 ABI1-210ENST00000376170 3362 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 ANGPT2-201ENST00000325203 5416 ntAPPRIS P3 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 AL603840.1-201ENST00000422374 4063 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 HELZ-207ENST00000580168 6279 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 GAPVD1-206ENST00000394104 6737 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 LYARP1-201ENST00000436977 1501 ntBASIC5.63□□□□□ -1.51
RNF220Q5VTB9 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 ZNF254-208ENST00000616028 3886 ntTSL 4 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 PRUNE2-204ENST00000376718 12584 ntAPPRIS P3 TSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 MLH1-206ENST00000435176 2428 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 ZCCHC6-201ENST00000277141 5724 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 MAGEB16-203ENST00000399988 1682 ntAPPRIS P2 TSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 USP45-204ENST00000369233 2514 ntTSL 5 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 PTK2-206ENST00000517712 3351 ntTSL 2 BASIC5.63□□□□□ -1.51
RNF220Q5VTB9 SRGAP1-201ENST00000355086 23331 ntAPPRIS P1 TSL 1 (best) BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 ERBIN-208ENST00000506030 4386 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AP005212.5-201ENST00000577614 3505 ntTSL 5 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 RALGAPA2-201ENST00000202677 6152 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 ZNF415-203ENST00000500065 2496 ntAPPRIS ALT2 TSL 4 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 TAS2R9-201ENST00000240691 1075 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 RNU4-28P-201ENST00000364739 141 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 ST3GAL3-212ENST00000372362 468 ntTSL 1 (best) BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 TRAV8-4-201ENST00000390438 469 ntAPPRIS P1 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 PSMA6P1-201ENST00000400275 741 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 HNMT-204ENST00000410115 1150 ntAPPRIS P1 TSL 5 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 RPL22P18-201ENST00000417197 377 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC027644.1-201ENST00000419595 298 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 MTCO2P21-201ENST00000419780 677 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 LINC01673-201ENST00000426418 468 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 RPS7P5-201ENST00000441482 581 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 BX248409.1-201ENST00000455497 255 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC005229.2-201ENST00000456995 399 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 NAP1L1P3-201ENST00000462291 880 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 MRPS33-203ENST00000467334 622 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 RPL23AP40-201ENST00000487630 390 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 SNRPCP11-201ENST00000492453 205 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC106822.1-201ENST00000502647 526 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC108866.1-203ENST00000504106 529 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC008413.2-201ENST00000507398 342 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC010285.3-201ENST00000511668 676 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 IGHV7-34-1-201ENST00000519200 350 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 IGKV2-36-201ENST00000519999 223 ntBASIC5.62□□□□□ -1.51
RNF220Q5VTB9 TMEM68-213ENST00000522576 826 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC009563.1-202ENST00000523365 643 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AP003086.3-201ENST00000527030 365 ntTSL 3 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AP003969.1-201ENST00000531846 400 ntTSL 2 BASIC5.62□□□□□ -1.51
RNF220Q5VTB9 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC5.62□□□□□ -1.51
Retrieved 100 of 98,524 protein–RNA pairs in 93.8 ms