Protein–RNA interactions for Protein: Q12946

FOXF1, Forkhead box protein F1, humanhuman

Predictions only

Length 379 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXF1Q12946 TBCAP2-201ENST00000416175 326 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 RPL34P6-201ENST00000432390 345 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 PRPF38AP2-201ENST00000438179 851 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC000111.2-201ENST00000448200 210 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 RN7SL329P-201ENST00000467740 299 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 AL035454.1-201ENST00000470758 433 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC093270.2-201ENST00000486157 792 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 RPL32P9-201ENST00000487963 407 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 OR2A3P-201ENST00000493774 953 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 ADGRL3-AS1-202ENST00000504135 542 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXF1Q12946 MS4A6A-210ENST00000529054 1160 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC4.46□□□□□ -1.7
FOXF1Q12946 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 LINC02188-201ENST00000562064 550 ntTSL 4 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AP005262.1-201ENST00000582646 997 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC018695.3-201ENST00000602617 408 ntTSL 2 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AL353662.3-201ENST00000625131 237 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 AL138828.1-201ENST00000626414 291 ntTSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 AC073869.10-201ENST00000642016 354 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 DNAJC16-210ENST00000616884 5882 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 ENKUR-205ENST00000615958 3294 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 MIPEPP2-201ENST00000422560 1819 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 AC012078.1-201ENST00000405035 1646 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 SMAD4-202ENST00000398417 8495 ntAPPRIS P1 TSL 5 BASIC4.46□□□□□ -1.7
FOXF1Q12946 OFD1P8Y-201ENST00000449148 1433 ntBASIC4.46□□□□□ -1.7
FOXF1Q12946 AL445623.2-201ENST00000640307 4805 ntTSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 PSMC6-201ENST00000445930 2188 ntAPPRIS P2 TSL 1 (best) BASIC4.46□□□□□ -1.7
FOXF1Q12946 TEX41-210ENST00000451774 2098 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 ATRX-202ENST00000395603 10218 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 HGF-201ENST00000222390 5989 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 CASC1-204ENST00000395990 2417 ntAPPRIS ALT2 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 AP001642.1-201ENST00000624727 2117 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 AC008505.1-201ENST00000637582 2025 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXF1Q12946 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 EIF1AY-201ENST00000361365 1390 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 BNIP3L-202ENST00000518611 1352 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXF1Q12946 SYCP1-209ENST00000613524 3034 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXF1Q12946 GTF2IP5-201ENST00000414608 731 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 OR2AM1P-201ENST00000422137 422 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXF1Q12946 DPH5-204ENST00000427040 609 ntTSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXF1Q12946 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXF1Q12946 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXF1Q12946 AC112498.1-201ENST00000444401 332 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 SUMO2P1-206ENST00000445436 284 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXF1Q12946 RPL7P61-201ENST00000451721 751 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 RN7SL97P-201ENST00000486780 299 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 CREM-238ENST00000488741 651 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXF1Q12946 DUBR-205ENST00000495228 411 ntTSL 2 BASIC4.45□□□□□ -1.7
FOXF1Q12946 BTF3P13-201ENST00000513224 490 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 OR5AZ1P-201ENST00000527448 943 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 AC005000.1-201ENST00000536192 288 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 AC092364.1-202ENST00000593824 565 ntTSL 4 BASIC4.45□□□□□ -1.7
FOXF1Q12946 L34079.2-201ENST00000597119 561 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXF1Q12946 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC4.45□□□□□ -1.7
FOXF1Q12946 Z95327.3-201ENST00000610385 572 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 AC241377.1-201ENST00000619797 406 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 CASC19-222ENST00000641321 1173 ntBASIC4.45□□□□□ -1.7
FOXF1Q12946 TDO2-208ENST00000536354 1701 ntAPPRIS P1 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 PLCH1-201ENST00000334686 6128 ntAPPRIS P3 TSL 1 (best) BASIC4.45□□□□□ -1.7
FOXF1Q12946 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXF1Q12946 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC4.45□□□□□ -1.7
FOXF1Q12946 DTNA-202ENST00000283365 6522 ntTSL 5 BASIC4.45□□□□□ -1.7
FOXF1Q12946 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 ATF7IP-214ENST00000540793 4142 ntAPPRIS P3 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 PLCB1-210ENST00000612075 6576 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 AL132656.3-201ENST00000606384 1595 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC4.44□□□□□ -1.7
FOXF1Q12946 ACTR3BP5-201ENST00000448440 1479 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 PEAK1-204ENST00000560626 19217 ntAPPRIS P1 TSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 SLC4A10-203ENST00000415876 5578 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 AP000542.2-201ENST00000623199 6179 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 IL5-201ENST00000231454 816 ntAPPRIS P1 TSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 OR10A5-201ENST00000299454 1054 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
FOXF1Q12946 OR2M5-201ENST00000366476 939 ntAPPRIS P1 BASIC4.44□□□□□ -1.7
FOXF1Q12946 AL109941.1-201ENST00000401925 229 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 METTL5-204ENST00000409340 472 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 LINC00364-201ENST00000415120 611 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXF1Q12946 AC092162.1-201ENST00000432828 434 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 AL133247.1-201ENST00000435713 646 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXF1Q12946 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 FMR1-IT1-201ENST00000441414 343 ntTSL 5 BASIC4.44□□□□□ -1.7
FOXF1Q12946 Z73495.1-201ENST00000444982 147 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXF1Q12946 AC090142.2-201ENST00000483263 416 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
FOXF1Q12946 NDUFA5P12-201ENST00000503796 343 ntBASIC4.44□□□□□ -1.7
FOXF1Q12946 LINC02429-202ENST00000513836 694 ntTSL 3 BASIC4.44□□□□□ -1.7
FOXF1Q12946 AC109830.1-202ENST00000515491 860 ntTSL 1 (best) BASIC4.44□□□□□ -1.7
Retrieved 100 of 98,524 protein–RNA pairs in 113.6 ms