Protein–RNA interactions for Protein: P57078

RIPK4, Receptor-interacting serine/threonine-protein kinase 4, humanhuman

Predictions only

Length 832 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RIPK4P57078 AC090023.2-201ENST00000540875 545 ntTSL 3 BASIC6.45□□□□□ -1.38
RIPK4P57078 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIPK4P57078 LINC02444-201ENST00000550723 1256 ntTSL 1 (best) BASIC6.45□□□□□ -1.38
RIPK4P57078 DUXA-201ENST00000554048 1006 ntAPPRIS P1 TSL 3 BASIC6.45□□□□□ -1.38
RIPK4P57078 EDDM3DP-201ENST00000554692 434 ntBASIC6.45□□□□□ -1.38
RIPK4P57078 AC006349.1-201ENST00000555526 235 ntBASIC6.45□□□□□ -1.38
RIPK4P57078 BGLT3-201ENST00000564523 994 ntBASIC6.45□□□□□ -1.38
RIPK4P57078 AC104984.1-201ENST00000581633 697 ntTSL 3 BASIC6.45□□□□□ -1.38
RIPK4P57078 SETP3-201ENST00000581726 813 ntBASIC6.45□□□□□ -1.38
RIPK4P57078 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.45□□□□□ -1.38
RIPK4P57078 SRD5A3-AS1-204ENST00000592823 542 ntTSL 5 BASIC6.45□□□□□ -1.38
RIPK4P57078 AC008536.1-201ENST00000602872 669 ntBASIC6.45□□□□□ -1.38
RIPK4P57078 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC6.45□□□□□ -1.38
RIPK4P57078 AP001784.1-201ENST00000624107 428 ntBASIC6.45□□□□□ -1.38
RIPK4P57078 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIPK4P57078 NSD1-202ENST00000354179 12195 ntTSL 5 BASIC6.45□□□□□ -1.38
RIPK4P57078 ERMN-201ENST00000397283 3760 ntTSL 2 BASIC6.45□□□□□ -1.38
RIPK4P57078 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC6.45□□□□□ -1.38
RIPK4P57078 C5orf51-204ENST00000612065 1391 ntTSL 5 BASIC6.44□□□□□ -1.38
RIPK4P57078 PMP2-201ENST00000256103 3608 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIPK4P57078 AL731532.2-201ENST00000623542 1953 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC6.44□□□□□ -1.38
RIPK4P57078 AC138409.2-201ENST00000514048 5001 ntTSL 5 BASIC6.44□□□□□ -1.38
RIPK4P57078 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIPK4P57078 RABGAP1L-205ENST00000367687 1849 ntTSL 2 BASIC6.44□□□□□ -1.38
RIPK4P57078 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIPK4P57078 POU1F1-201ENST00000344265 1149 ntTSL 5 BASIC6.44□□□□□ -1.38
RIPK4P57078 RNA5SP345-201ENST00000410646 108 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 AC016769.2-201ENST00000414815 475 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 AL445644.1-201ENST00000436524 751 ntTSL 2 BASIC6.44□□□□□ -1.38
RIPK4P57078 AC099654.1-201ENST00000442649 407 ntTSL 3 BASIC6.44□□□□□ -1.38
RIPK4P57078 AP000770.1-201ENST00000444123 583 ntTSL 5 BASIC6.44□□□□□ -1.38
RIPK4P57078 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.44□□□□□ -1.38
RIPK4P57078 AC063943.1-201ENST00000465434 453 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 AC092324.1-201ENST00000468671 324 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 AC083982.1-201ENST00000485679 344 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 AC069304.1-201ENST00000491593 704 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 FXN-205ENST00000498653 856 ntTSL 1 (best) BASIC6.44□□□□□ -1.38
RIPK4P57078 AP006245.2-201ENST00000522004 300 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 LINC02156-201ENST00000552320 483 ntTSL 2 BASIC6.44□□□□□ -1.38
RIPK4P57078 AL132712.2-201ENST00000556653 127 ntTSL 3 BASIC6.44□□□□□ -1.38
RIPK4P57078 AC127024.5-201ENST00000580085 462 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 MIR3936-201ENST00000584304 110 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 AC007497.1-201ENST00000610421 561 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 PPEF1-202ENST00000361511 2890 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIPK4P57078 CXCL9-201ENST00000264888 2740 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIPK4P57078 AP001157.1-201ENST00000550837 2339 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 ZNF652P1-201ENST00000442420 1309 ntBASIC6.44□□□□□ -1.38
RIPK4P57078 DNAH5-201ENST00000265104 15633 ntAPPRIS P1 TSL 1 (best) BASIC6.44□□□□□ -1.38
RIPK4P57078 ARHGAP28-205ENST00000531294 2171 ntAPPRIS ALT2 TSL 5 BASIC6.44□□□□□ -1.38
RIPK4P57078 PAN3-202ENST00000399613 4940 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 ZEB2-241ENST00000637304 9158 ntTSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 CFH-206ENST00000630130 1658 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 MYNN-203ENST00000544106 4815 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 CFAP70-201ENST00000310715 3703 ntAPPRIS P1 TSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 ZC3H12B-201ENST00000338957 7256 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 KLRC3-202ENST00000396439 1028 ntAPPRIS ALT2 TSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 MIR937-201ENST00000401271 86 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 NPM1P40-201ENST00000412758 733 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 AL603962.1-201ENST00000413148 436 ntTSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC6.43□□□□□ -1.38
RIPK4P57078 AL360081.1-201ENST00000428299 555 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 LINC02476-202ENST00000431071 559 ntTSL 4 BASIC6.43□□□□□ -1.38
RIPK4P57078 TEX41-205ENST00000431734 529 ntTSL 4 BASIC6.43□□□□□ -1.38
RIPK4P57078 CYCSP24-201ENST00000445119 316 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC6.43□□□□□ -1.38
RIPK4P57078 C2orf80-206ENST00000451346 979 ntTSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 AC116562.1-201ENST00000485355 781 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC6.43□□□□□ -1.38
RIPK4P57078 LINC02218-202ENST00000504998 582 ntTSL 4 BASIC6.43□□□□□ -1.38
RIPK4P57078 OR7H2P-201ENST00000513483 306 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 AC068775.2-201ENST00000539033 998 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 AGGF1P9-201ENST00000561884 913 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 AC010424.2-201ENST00000607594 443 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 BX005214.3-202ENST00000619809 325 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 SYNJ2BP-COX16-205ENST00000621525 929 ntAPPRIS P2 TSL 2 BASIC6.43□□□□□ -1.38
RIPK4P57078 AC243960.7-201ENST00000623532 707 ntBASIC6.43□□□□□ -1.38
RIPK4P57078 NXT2-201ENST00000218004 2692 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 EMSY-205ENST00000524767 4116 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 PTPRB-202ENST00000334414 12316 ntAPPRIS P4 TSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 PLCB1-211ENST00000617005 6458 ntTSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 AL583808.2-201ENST00000418078 1382 ntTSL 5 BASIC6.43□□□□□ -1.38
RIPK4P57078 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC6.43□□□□□ -1.38
RIPK4P57078 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RIPK4P57078 STIL-204ENST00000396221 4558 ntAPPRIS ALT2 TSL 1 (best) BASIC6.42□□□□□ -1.38
RIPK4P57078 CROT-204ENST00000442291 1993 ntTSL 5 BASIC6.42□□□□□ -1.38
RIPK4P57078 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC6.42□□□□□ -1.38
RIPK4P57078 DNAH8-201ENST00000327475 14360 ntAPPRIS P2 TSL 5 BASIC6.42□□□□□ -1.38
RIPK4P57078 TNFSF18-201ENST00000404377 2008 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RIPK4P57078 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC6.42□□□□□ -1.38
RIPK4P57078 EIF4EBP2-201ENST00000373218 7257 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
RIPK4P57078 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
RIPK4P57078 AC008758.3-201ENST00000507003 1829 ntBASIC6.42□□□□□ -1.38
RIPK4P57078 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC6.42□□□□□ -1.38
RIPK4P57078 FOXP1-IT1-201ENST00000498714 3539 ntTSL 2 BASIC6.42□□□□□ -1.38
RIPK4P57078 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
RIPK4P57078 RN7SKP103-201ENST00000363848 320 ntBASIC6.42□□□□□ -1.38
RIPK4P57078 CCL7-203ENST00000394630 687 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms