Protein–RNA interactions for Protein: P56856

CLDN18, Claudin-18, humanhuman

Predictions only

Length 261 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLDN18P56856 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN18P56856 Metazoa_SRP.93-201ENST00000622525 276 ntBASIC4.62□□□□□ -1.67
CLDN18P56856 OR2T7-202ENST00000641557 3409 ntAPPRIS P1 BASIC4.62□□□□□ -1.67
CLDN18P56856 INSIG2-208ENST00000614681 1347 ntTSL 5 BASIC4.62□□□□□ -1.67
CLDN18P56856 RALGAPB-202ENST00000397040 8435 ntAPPRIS P3 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN18P56856 RXFP1-206ENST00000460056 2735 ntTSL 2 BASIC4.62□□□□□ -1.67
CLDN18P56856 MTHFD2L-207ENST00000433372 1407 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN18P56856 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN18P56856 FNIP1-201ENST00000307954 6366 ntTSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN18P56856 AC115220.1-201ENST00000330020 1453 ntAPPRIS P1 TSL 3 BASIC4.62□□□□□ -1.67
CLDN18P56856 FAM196B-201ENST00000377365 2999 ntAPPRIS P1 TSL 2 BASIC4.62□□□□□ -1.67
CLDN18P56856 SPATA5-201ENST00000274008 8137 ntAPPRIS P1 TSL 1 (best) BASIC4.62□□□□□ -1.67
CLDN18P56856 LINC00504-201ENST00000505089 4672 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN18P56856 EDIL3-202ENST00000380138 4244 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 NCOA7-202ENST00000368357 5521 ntAPPRIS P3 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 DCLRE1A-201ENST00000361384 4468 ntAPPRIS P1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 CASC19-201ENST00000500112 5735 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 MLIP-203ENST00000370877 1234 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 VDAC2P1-201ENST00000399358 958 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 GPS2P1-201ENST00000411761 986 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 CYP3A43-205ENST00000415413 990 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 Z82246.1-201ENST00000428201 457 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN18P56856 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 NDUFA5P8-201ENST00000449019 346 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 AL133244.1-201ENST00000456007 258 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 AC020779.1-201ENST00000478757 796 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 HMGN2P25-201ENST00000486956 268 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 RPSAP51-201ENST00000497462 645 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 AC092709.1-201ENST00000521355 1045 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 AC073023.1-201ENST00000522896 773 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 C14orf105-210ENST00000534126 1030 ntAPPRIS ALT1 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 PRR4-212ENST00000544994 326 ntAPPRIS ALT2 TSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN18P56856 AP002383.3-201ENST00000545958 593 ntTSL 4 BASIC4.61□□□□□ -1.67
CLDN18P56856 AC104938.1-202ENST00000563041 630 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN18P56856 LINC01859-201ENST00000565584 1024 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN18P56856 MIR4646-201ENST00000580775 63 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 AC009303.2-201ENST00000585381 1083 ntTSL 3 BASIC4.61□□□□□ -1.67
CLDN18P56856 LINC01676-204ENST00000595309 871 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 AC023813.4-201ENST00000607580 580 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 AC133644.2-201ENST00000608142 540 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 Z98949.1-220ENST00000609809 804 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 AL627230.1-201ENST00000613077 211 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 AL591926.8-201ENST00000616876 211 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 BX664718.1-201ENST00000439824 3224 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN18P56856 DNAH12-203ENST00000389536 2613 ntTSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 TNFAIP8-207ENST00000513374 1385 ntTSL 2 BASIC4.61□□□□□ -1.67
CLDN18P56856 SRRM1-202ENST00000374389 3110 ntAPPRIS ALT2 TSL 5 BASIC4.61□□□□□ -1.67
CLDN18P56856 MIPOL1-204ENST00000539062 2389 ntTSL 1 (best) BASIC4.61□□□□□ -1.67
CLDN18P56856 ERVFRD-3-201ENST00000578561 1617 ntBASIC4.61□□□□□ -1.67
CLDN18P56856 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 ZNF334-203ENST00000593880 2635 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 IQCH-214ENST00000629425 1822 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLDN18P56856 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN18P56856 ADGRL2-206ENST00000370721 5023 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN18P56856 CDK14-203ENST00000406263 5163 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 AL033384.1-202ENST00000431554 3104 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 SMNDC1-202ENST00000369603 4341 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 MYO16-201ENST00000251041 3492 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN18P56856 VPS50-202ENST00000305866 3613 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 ATP2C1-210ENST00000505330 4888 ntAPPRIS ALT2 TSL 2 BASIC4.6□□□□□ -1.67
CLDN18P56856 EIF3M-208ENST00000531120 5051 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 OR8I2-201ENST00000302124 1010 ntAPPRIS P1 BASIC4.6□□□□□ -1.67
CLDN18P56856 UQCR10-201ENST00000330029 916 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 RNA5SP223-201ENST00000365174 120 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 MRRF-207ENST00000373729 870 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 MT-RNR1-201ENST00000389680 954 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 CHMP1B2P-201ENST00000399581 597 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AL109941.1-201ENST00000401925 229 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AL078599.1-201ENST00000402075 293 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AL645733.1-201ENST00000402250 217 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 RN7SKP125-201ENST00000410481 302 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AL591468.1-201ENST00000417932 573 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 RBMY2QP-201ENST00000429799 1147 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 AL354863.1-204ENST00000436430 556 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN18P56856 RPL12P3-201ENST00000440080 396 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 OTX2P1-201ENST00000450956 354 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 RAD21-204ENST00000518055 896 ntTSL 2 BASIC4.6□□□□□ -1.67
CLDN18P56856 AC022616.2-201ENST00000523185 300 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AP000676.2-201ENST00000529711 301 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 MIR4691-201ENST00000583764 85 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 AP005131.3-201ENST00000590042 665 ntTSL 3 BASIC4.6□□□□□ -1.67
CLDN18P56856 AC097467.3-209ENST00000595760 615 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN18P56856 AC096553.1-201ENST00000605169 829 ntBASIC4.6□□□□□ -1.67
CLDN18P56856 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC4.6□□□□□ -1.67
CLDN18P56856 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 CTSV-203ENST00000538255 4322 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 CSPP1-201ENST00000262210 4367 ntAPPRIS P3 TSL 1 (best) BASIC4.6□□□□□ -1.67
CLDN18P56856 TSPAN8-202ENST00000393330 1516 ntAPPRIS P1 TSL 1 (best) BASIC4.6□□□□□ -1.67
Retrieved 100 of 98,524 protein–RNA pairs in 84.1 ms