Protein–RNA interactions for Protein: P54252

ATXN3, Ataxin-3, humanhuman

Predicted RBP Predictions only

Length 364 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3P54252 FANCI-201ENST00000300027 4713 ntAPPRIS P3 TSL 5 BASIC5.39□□□□□ -1.55
ATXN3P54252 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.39□□□□□ -1.55
ATXN3P54252 ZNF83-202ENST00000536937 2726 ntAPPRIS P1 TSL 2 BASIC5.39□□□□□ -1.55
ATXN3P54252 FBXO38-218ENST00000513826 3585 ntTSL 1 (best) BASIC5.39□□□□□ -1.55
ATXN3P54252 VPS35P1-201ENST00000563400 1518 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 NPIPB9-201ENST00000357796 2037 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 AC009962.1-201ENST00000567327 3813 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 MAPK6PS2-201ENST00000379571 2060 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 MCF2L2-202ENST00000414362 3031 ntTSL 2 BASIC5.38□□□□□ -1.55
ATXN3P54252 A2MP1-204ENST00000566278 4130 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 ABCC9-204ENST00000538350 2672 ntTSL 2 BASIC5.38□□□□□ -1.55
ATXN3P54252 STEAP2-205ENST00000394629 2261 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 AL358178.1-201ENST00000407698 397 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 RNA5SP487-201ENST00000410186 122 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 DPP10-AS3-201ENST00000417844 665 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 PPP2R2DP1-201ENST00000420526 637 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 AC009220.1-201ENST00000451614 275 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 AC005674.1-201ENST00000503493 459 ntTSL 3 BASIC5.38□□□□□ -1.55
ATXN3P54252 AK4P6-201ENST00000505168 528 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 HMGB1P44-201ENST00000508597 572 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 GIN1-203ENST00000508629 1040 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 LINC02223-202ENST00000511596 578 ntTSL 5 BASIC5.38□□□□□ -1.55
ATXN3P54252 IGLV3-24-201ENST00000517477 197 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 GSTP1P1-201ENST00000548078 319 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 EDDM3DP-201ENST00000554692 434 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.38□□□□□ -1.55
ATXN3P54252 RPL10P14-201ENST00000565265 298 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 AC025271.2-201ENST00000566990 800 ntTSL 3 BASIC5.38□□□□□ -1.55
ATXN3P54252 MIR4330-201ENST00000579077 105 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 AP001542.1-201ENST00000591314 200 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 AC010487.1-201ENST00000594408 1172 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 DARS-AS1-211ENST00000595061 720 ntTSL 5 BASIC5.38□□□□□ -1.55
ATXN3P54252 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC5.38□□□□□ -1.55
ATXN3P54252 AC087283.1-201ENST00000604029 1074 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 OR8H1-202ENST00000610894 927 ntAPPRIS ALT1 BASIC5.38□□□□□ -1.55
ATXN3P54252 AC109583.2-201ENST00000617367 129 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 AC026367.3-201ENST00000619032 590 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 MIR325HG-202ENST00000626832 598 ntTSL 4 BASIC5.38□□□□□ -1.55
ATXN3P54252 NEK3-211ENST00000629912 141 ntTSL 5 BASIC5.38□□□□□ -1.55
ATXN3P54252 AC011287.1-204ENST00000640300 1213 ntTSL 5 BASIC5.38□□□□□ -1.55
ATXN3P54252 LINC01739-205ENST00000641890 573 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 NAV2-AS5-201ENST00000528726 3307 ntTSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 FSHB-202ENST00000417547 1890 ntAPPRIS P1 TSL 5 BASIC5.38□□□□□ -1.55
ATXN3P54252 TMEM154-201ENST00000304385 10698 ntAPPRIS P2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC5.38□□□□□ -1.55
ATXN3P54252 ALS2CR12-202ENST00000392257 1943 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC5.38□□□□□ -1.55
ATXN3P54252 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 OR2AT4-205ENST00000641931 8357 ntAPPRIS P1 BASIC5.38□□□□□ -1.55
ATXN3P54252 PSG1-204ENST00000436291 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 ERP27-201ENST00000266397 2096 ntAPPRIS P1 TSL 1 (best) BASIC5.38□□□□□ -1.55
ATXN3P54252 PANDAR-201ENST00000629595 1506 ntBASIC5.38□□□□□ -1.55
ATXN3P54252 LTN1-202ENST00000389194 7749 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATXN3P54252 SLC12A6-216ENST00000560164 3744 ntTSL 2 BASIC5.37□□□□□ -1.55
ATXN3P54252 Z95331.1-201ENST00000623075 23112 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 MLIP-213ENST00000514921 5743 ntAPPRIS ALT2 TSL 1 (best) BASIC5.37□□□□□ -1.55
ATXN3P54252 MAPK10-263ENST00000641052 4307 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.37□□□□□ -1.55
ATXN3P54252 OR4F13P-202ENST00000560066 2054 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC092681.1-201ENST00000297369 291 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 RNU6-386P-201ENST00000362650 107 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 IGLV5-48-201ENST00000390293 369 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ATXN3P54252 TAS2R31-201ENST00000390675 1021 ntAPPRIS P1 BASIC5.37□□□□□ -1.55
ATXN3P54252 RPL5P19-201ENST00000404228 893 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 RAB28P1-201ENST00000411517 641 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AL049812.3-201ENST00000412348 417 ntTSL 3 BASIC5.37□□□□□ -1.55
ATXN3P54252 LINC00342-201ENST00000412393 654 ntTSL 3 BASIC5.37□□□□□ -1.55
ATXN3P54252 FAR2P2-201ENST00000413041 594 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AL360227.1-201ENST00000425364 433 ntTSL 3 BASIC5.37□□□□□ -1.55
ATXN3P54252 FAR2P4-202ENST00000425399 584 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC104837.2-201ENST00000427236 424 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AL354863.1-202ENST00000431695 494 ntTSL 5 BASIC5.37□□□□□ -1.55
ATXN3P54252 LINC02532-206ENST00000433965 570 ntTSL 2 BASIC5.37□□□□□ -1.55
ATXN3P54252 AP001604.1-201ENST00000447384 954 ntTSL 1 (best) BASIC5.37□□□□□ -1.55
ATXN3P54252 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC5.37□□□□□ -1.55
ATXN3P54252 AL356390.1-201ENST00000455684 397 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC5.37□□□□□ -1.55
ATXN3P54252 RPS3AP41-201ENST00000462701 778 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 RN7SL205P-201ENST00000490174 284 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC015864.1-201ENST00000496512 544 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 CSNK1A1P3-201ENST00000504105 330 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC091917.2-201ENST00000505002 744 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC020937.1-201ENST00000519677 1013 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 SDCBP-207ENST00000520168 1097 ntTSL 2 BASIC5.37□□□□□ -1.55
ATXN3P54252 AC055874.1-201ENST00000561458 479 ntTSL 2 BASIC5.37□□□□□ -1.55
ATXN3P54252 DISC1FP1-202ENST00000562245 774 ntTSL 3 BASIC5.37□□□□□ -1.55
ATXN3P54252 AC005341.1-201ENST00000571086 708 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AJ003147.1-201ENST00000576762 454 ntTSL 3 BASIC5.37□□□□□ -1.55
ATXN3P54252 RN7SL52P-201ENST00000584271 284 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC5.37□□□□□ -1.55
ATXN3P54252 AF230666.2-201ENST00000602328 725 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 NANOGP3-201ENST00000605855 286 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 AC012213.4-201ENST00000606457 354 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 RN7SL722P-201ENST00000617780 284 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 RN7SL565P-201ENST00000618246 284 ntBASIC5.37□□□□□ -1.55
ATXN3P54252 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC5.37□□□□□ -1.55
ATXN3P54252 AC012593.1-212ENST00000627058 580 ntTSL 5 BASIC5.37□□□□□ -1.55
Retrieved 100 of 98,524 protein–RNA pairs in 99 ms