Protein–RNA interactions for Protein: P51784

USP11, Ubiquitin carboxyl-terminal hydrolase 11, humanhuman

Predictions only

Length 963 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USP11P51784 LDHC-205ENST00000537486 583 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 AC090502.3-201ENST00000552046 529 ntTSL 3 BASIC7.08□□□□□ -1.28
USP11P51784 AC011611.5-201ENST00000552477 578 ntBASIC7.08□□□□□ -1.28
USP11P51784 AC131532.1-201ENST00000555596 519 ntTSL 4 BASIC7.08□□□□□ -1.28
USP11P51784 TMEM202-202ENST00000567679 588 ntAPPRIS ALT2 TSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 AC138907.7-201ENST00000568972 358 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 AC012146.1-201ENST00000571138 462 ntTSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 ROCK1P1-201ENST00000573767 549 ntBASIC7.08□□□□□ -1.28
USP11P51784 LINC01476-202ENST00000584262 635 ntTSL 4 BASIC7.08□□□□□ -1.28
USP11P51784 APOC2-205ENST00000592257 444 ntTSL 3 BASIC7.08□□□□□ -1.28
USP11P51784 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 LINC01435-212ENST00000601212 742 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 AC018618.2-201ENST00000604770 446 ntBASIC7.08□□□□□ -1.28
USP11P51784 AL391497.1-201ENST00000608671 547 ntBASIC7.08□□□□□ -1.28
USP11P51784 Z99755.2-201ENST00000610215 364 ntTSL 3 BASIC7.08□□□□□ -1.28
USP11P51784 AC159540.2-206ENST00000619371 355 ntTSL 3 BASIC7.08□□□□□ -1.28
USP11P51784 IGF2BP3-218ENST00000619562 2126 ntTSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 CDON-202ENST00000392693 9138 ntAPPRIS ALT2 TSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 ZNF630-202ENST00000409324 2455 ntAPPRIS P2 TSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 ARMCX5-201ENST00000246174 2899 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 AC092447.7-201ENST00000422212 1621 ntBASIC7.08□□□□□ -1.28
USP11P51784 CFAP221-203ENST00000413369 2801 ntAPPRIS P1 TSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 LRRC3B-205ENST00000456208 1551 ntAPPRIS P1 TSL 1 (best) BASIC7.08□□□□□ -1.28
USP11P51784 AC104662.2-201ENST00000512921 1388 ntAPPRIS P1 TSL 2 BASIC7.08□□□□□ -1.28
USP11P51784 NRCAM-202ENST00000379022 3900 ntTSL 5 BASIC7.08□□□□□ -1.28
USP11P51784 SPINK5-203ENST00000398454 2915 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 CD53-201ENST00000271324 1505 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 CABS1-201ENST00000273936 1532 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 KLHL13-202ENST00000371876 5331 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 LINC01505-205ENST00000636028 2298 ntTSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 MTPAP-201ENST00000263063 5601 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 RALYL-211ENST00000523850 1684 ntTSL 2 BASIC7.07□□□□□ -1.28
USP11P51784 HCG18-239ENST00000454129 4433 ntTSL 4 BASIC7.07□□□□□ -1.28
USP11P51784 LGALS17A-201ENST00000412609 2562 ntTSL 2 BASIC7.07□□□□□ -1.28
USP11P51784 MAPK10-261ENST00000641050 3109 ntBASIC7.07□□□□□ -1.28
USP11P51784 OR4C11-201ENST00000302231 1045 ntAPPRIS P1 BASIC7.07□□□□□ -1.28
USP11P51784 OR4G2P-201ENST00000328113 903 ntBASIC7.07□□□□□ -1.28
USP11P51784 HNMT-203ENST00000329366 835 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 Y_RNA.11-201ENST00000362375 109 ntBASIC7.07□□□□□ -1.28
USP11P51784 Y_RNA.465-201ENST00000384293 102 ntBASIC7.07□□□□□ -1.28
USP11P51784 PPP1R7-203ENST00000401987 820 ntTSL 3 BASIC7.07□□□□□ -1.28
USP11P51784 AC245052.5-201ENST00000416320 649 ntBASIC7.07□□□□□ -1.28
USP11P51784 AJ239322.2-201ENST00000421696 575 ntTSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 AL354707.3-201ENST00000427308 331 ntBASIC7.07□□□□□ -1.28
USP11P51784 AL160004.1-201ENST00000434311 478 ntTSL 3 BASIC7.07□□□□□ -1.28
USP11P51784 GAPDHP23-201ENST00000444823 993 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC023271.1-201ENST00000445936 1090 ntBASIC7.07□□□□□ -1.28
USP11P51784 RN7SL168P-201ENST00000463821 279 ntBASIC7.07□□□□□ -1.28
USP11P51784 PPP1R11P1-201ENST00000486095 376 ntBASIC7.07□□□□□ -1.28
USP11P51784 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.07□□□□□ -1.28
USP11P51784 AC104090.1-201ENST00000506341 1171 ntBASIC7.07□□□□□ -1.28
USP11P51784 STPG2-AS1-201ENST00000508933 537 ntTSL 4 BASIC7.07□□□□□ -1.28
USP11P51784 LINC02512-201ENST00000509548 429 ntTSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 RNA5SP473-201ENST00000516402 125 ntBASIC7.07□□□□□ -1.28
USP11P51784 RNA5SP434-201ENST00000516647 121 ntBASIC7.07□□□□□ -1.28
USP11P51784 TBCA-206ENST00000518338 551 ntTSL 2 BASIC7.07□□□□□ -1.28
USP11P51784 MED28P5-201ENST00000528254 438 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC022509.3-201ENST00000535914 436 ntTSL 3 BASIC7.07□□□□□ -1.28
USP11P51784 TSSK4-207ENST00000556621 896 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 PSMA3-213ENST00000557508 814 ntTSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 AADACP1-206ENST00000561502 1193 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC026826.3-201ENST00000561747 158 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC116553.2-201ENST00000564203 463 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC7.07□□□□□ -1.28
USP11P51784 AP005262.1-201ENST00000582646 997 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC027229.1-201ENST00000583887 253 ntBASIC7.07□□□□□ -1.28
USP11P51784 LINC01841-201ENST00000586698 573 ntTSL 4 BASIC7.07□□□□□ -1.28
USP11P51784 AC003991.1-201ENST00000594469 484 ntTSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 AC124916.2-201ENST00000604416 224 ntBASIC7.07□□□□□ -1.28
USP11P51784 ACYP2-208ENST00000606865 674 ntTSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 MIR7109-201ENST00000613748 65 ntBASIC7.07□□□□□ -1.28
USP11P51784 Metazoa_SRP.199-201ENST00000615501 281 ntBASIC7.07□□□□□ -1.28
USP11P51784 MALAT1-210ENST00000617489 318 ntTSL 2 BASIC7.07□□□□□ -1.28
USP11P51784 AC139769.3-201ENST00000618383 175 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC073488.6-201ENST00000632293 754 ntBASIC7.07□□□□□ -1.28
USP11P51784 AC012564.1-201ENST00000636802 557 ntTSL 4 BASIC7.07□□□□□ -1.28
USP11P51784 LINC01450-201ENST00000443406 3263 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 GBA3-206ENST00000610628 2154 ntAPPRIS ALT2 TSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 LMO3-202ENST00000320122 3759 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 CLEC12A-203ENST00000355690 1428 ntAPPRIS ALT2 TSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 CR1-201ENST00000367049 7470 ntAPPRIS P1 TSL 5 BASIC7.07□□□□□ -1.28
USP11P51784 FBXO8-205ENST00000615392 1591 ntTSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 AQR-201ENST00000156471 9694 ntAPPRIS P1 TSL 1 (best) BASIC7.07□□□□□ -1.28
USP11P51784 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.07□□□□□ -1.28
USP11P51784 CCDC129-211ENST00000615280 4142 ntAPPRIS ALT2 TSL 2 BASIC7.07□□□□□ -1.28
USP11P51784 POC1B-201ENST00000313546 3001 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 PLD1-202ENST00000351298 5604 ntTSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 RBPJ-202ENST00000342320 5761 ntAPPRIS P3 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 PTER-202ENST00000378000 3777 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 AC024651.2-201ENST00000562480 2098 ntBASIC7.06□□□□□ -1.28
USP11P51784 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC7.06□□□□□ -1.28
USP11P51784 OR1L8-201ENST00000304865 1061 ntAPPRIS P1 BASIC7.06□□□□□ -1.28
USP11P51784 Y_RNA.70-201ENST00000362886 110 ntBASIC7.06□□□□□ -1.28
USP11P51784 Y_RNA.192-201ENST00000363977 102 ntBASIC7.06□□□□□ -1.28
USP11P51784 RN7SKP187-201ENST00000365536 330 ntBASIC7.06□□□□□ -1.28
USP11P51784 S100A5-201ENST00000368717 506 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 FAM24A-201ENST00000368894 596 ntAPPRIS P1 TSL 3 BASIC7.06□□□□□ -1.28
USP11P51784 LINC01620-202ENST00000372910 649 ntTSL 5 BASIC7.06□□□□□ -1.28
Retrieved 100 of 98,524 protein–RNA pairs in 78.5 ms