Protein–RNA interactions for Protein: P35244

RPA3, Replication protein A 14 kDa subunit, humanhuman

Predicted RBP Predictions only

Length 121 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPA3P35244 ARPP19-204ENST00000563277 955 ntTSL 2 BASIC4.98□□□□□ -1.61
RPA3P35244 MOCS2-209ENST00000582677 741 ntTSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 MIR4435-2HG-220ENST00000609902 603 ntTSL 3 BASIC4.98□□□□□ -1.61
RPA3P35244 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC4.98□□□□□ -1.61
RPA3P35244 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 NBPF9-208ENST00000621074 4302 ntTSL 5 BASIC4.98□□□□□ -1.61
RPA3P35244 TEX26-201ENST00000380473 1478 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 C6-201ENST00000263413 3661 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 CDY11P-201ENST00000447168 1651 ntBASIC4.98□□□□□ -1.61
RPA3P35244 C4BPAP1-201ENST00000415474 1893 ntBASIC4.98□□□□□ -1.61
RPA3P35244 UBR1-201ENST00000290650 7761 ntAPPRIS P1 TSL 1 (best) BASIC4.98□□□□□ -1.61
RPA3P35244 MAPK10-349ENST00000641767 3661 ntBASIC4.98□□□□□ -1.61
RPA3P35244 MOCS2-203ENST00000450852 1337 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 DDX18P5-201ENST00000534547 1306 ntBASIC4.97□□□□□ -1.61
RPA3P35244 RBMS3-205ENST00000434693 8540 ntTSL 5 BASIC4.97□□□□□ -1.61
RPA3P35244 SH3BGRL-201ENST00000373212 1923 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 BCLAF1P2-201ENST00000624956 2609 ntBASIC4.97□□□□□ -1.61
RPA3P35244 ZBTB21-201ENST00000310826 7449 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC4.97□□□□□ -1.61
RPA3P35244 NCOA3-201ENST00000371997 6750 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 IPO5-201ENST00000261574 6003 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 PPP1R2P3-201ENST00000522232 1991 ntAPPRIS P1 BASIC4.97□□□□□ -1.61
RPA3P35244 FOXP2-217ENST00000462331 1388 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 PIH1D2-201ENST00000280350 1241 ntAPPRIS P1 TSL 5 BASIC4.97□□□□□ -1.61
RPA3P35244 SNORA73.1-201ENST00000363107 205 ntBASIC4.97□□□□□ -1.61
RPA3P35244 DNAJA1P4-201ENST00000406473 1166 ntBASIC4.97□□□□□ -1.61
RPA3P35244 SNORA77-201ENST00000408716 125 ntBASIC4.97□□□□□ -1.61
RPA3P35244 LINC02528-201ENST00000417800 381 ntTSL 2 BASIC4.97□□□□□ -1.61
RPA3P35244 AC008073.2-201ENST00000428344 792 ntTSL 5 BASIC4.97□□□□□ -1.61
RPA3P35244 PIH1D2-202ENST00000431456 1245 ntTSL 5 BASIC4.97□□□□□ -1.61
RPA3P35244 NMNAT1P2-201ENST00000435192 860 ntBASIC4.97□□□□□ -1.61
RPA3P35244 AL121957.1-202ENST00000437040 329 ntTSL 3 BASIC4.97□□□□□ -1.61
RPA3P35244 AC096644.1-201ENST00000446169 390 ntTSL 3 BASIC4.97□□□□□ -1.61
RPA3P35244 RN7SL177P-201ENST00000476596 299 ntBASIC4.97□□□□□ -1.61
RPA3P35244 AC005699.1-205ENST00000510639 427 ntTSL 2 BASIC4.97□□□□□ -1.61
RPA3P35244 RN7SKP260-201ENST00000516907 149 ntBASIC4.97□□□□□ -1.61
RPA3P35244 OR4A46P-201ENST00000527255 933 ntBASIC4.97□□□□□ -1.61
RPA3P35244 LINC00944-202ENST00000540684 888 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 AP002373.2-201ENST00000541631 1060 ntBASIC4.97□□□□□ -1.61
RPA3P35244 AC078880.2-201ENST00000547948 843 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 OR11J2P-201ENST00000555298 907 ntBASIC4.97□□□□□ -1.61
RPA3P35244 AL161752.1-201ENST00000557721 263 ntTSL 2 BASIC4.97□□□□□ -1.61
RPA3P35244 WDR61-205ENST00000558459 884 ntTSL 3 BASIC4.97□□□□□ -1.61
RPA3P35244 AC129510.2-201ENST00000582774 345 ntTSL 5 BASIC4.97□□□□□ -1.61
RPA3P35244 AC092683.1-203ENST00000594050 654 ntTSL 5 BASIC4.97□□□□□ -1.61
RPA3P35244 ZNF284-201ENST00000421176 4351 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 ZNF534-204ENST00000433050 2047 ntAPPRIS ALT2 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 SMC2-203ENST00000374793 5909 ntAPPRIS P1 TSL 1 (best) BASIC4.97□□□□□ -1.61
RPA3P35244 KIF23-206ENST00000558585 2296 ntTSL 2 BASIC4.97□□□□□ -1.61
RPA3P35244 AC107068.1-201ENST00000563286 4218 ntBASIC4.96□□□□□ -1.61
RPA3P35244 PPP2R2A-201ENST00000315985 1878 ntAPPRIS ALT1 TSL 2 BASIC4.96□□□□□ -1.61
RPA3P35244 KIF2A-203ENST00000407818 2315 ntTSL 1 (best) BASIC4.96□□□□□ -1.61
RPA3P35244 FAM35A-201ENST00000298784 3402 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RPA3P35244 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 LINGO2-201ENST00000308675 3031 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RPA3P35244 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 CKS1B-201ENST00000308987 759 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 AL353625.1-202ENST00000366273 571 ntBASIC4.96□□□□□ -1.62
RPA3P35244 MIR1178-201ENST00000408396 91 ntBASIC4.96□□□□□ -1.62
RPA3P35244 U3.36-201ENST00000408418 213 ntBASIC4.96□□□□□ -1.62
RPA3P35244 ATP6V1G1P7-201ENST00000415853 349 ntBASIC4.96□□□□□ -1.62
RPA3P35244 TRBV29-1-201ENST00000422143 402 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RPA3P35244 BX510359.3-201ENST00000422168 306 ntBASIC4.96□□□□□ -1.62
RPA3P35244 REREP1Y-201ENST00000422655 198 ntBASIC4.96□□□□□ -1.62
RPA3P35244 RGS17P1-201ENST00000423358 553 ntBASIC4.96□□□□□ -1.62
RPA3P35244 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 AL449043.1-202ENST00000427318 582 ntTSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 AC068481.1-202ENST00000428379 555 ntTSL 4 BASIC4.96□□□□□ -1.62
RPA3P35244 AC005033.1-201ENST00000428904 813 ntBASIC4.96□□□□□ -1.62
RPA3P35244 AC009478.1-201ENST00000429816 562 ntTSL 3 BASIC4.96□□□□□ -1.62
RPA3P35244 AL450992.2-201ENST00000434182 506 ntTSL 5 BASIC4.96□□□□□ -1.62
RPA3P35244 REREP2Y-201ENST00000439103 200 ntBASIC4.96□□□□□ -1.62
RPA3P35244 RPS29P9-201ENST00000440360 171 ntBASIC4.96□□□□□ -1.62
RPA3P35244 AC110749.1-201ENST00000462007 357 ntBASIC4.96□□□□□ -1.62
RPA3P35244 AC092957.1-201ENST00000473299 570 ntTSL 4 BASIC4.96□□□□□ -1.62
RPA3P35244 SUMO2P4-201ENST00000504193 276 ntBASIC4.96□□□□□ -1.62
RPA3P35244 AC010395.1-201ENST00000507627 697 ntTSL 5 BASIC4.96□□□□□ -1.62
RPA3P35244 AC097534.1-201ENST00000507803 521 ntTSL 4 BASIC4.96□□□□□ -1.62
RPA3P35244 RPL26L1-203ENST00000519239 679 ntAPPRIS P1 TSL 2 BASIC4.96□□□□□ -1.62
RPA3P35244 NOP10-202ENST00000557912 436 ntTSL 2 BASIC4.96□□□□□ -1.62
RPA3P35244 AC233702.9-201ENST00000581528 203 ntBASIC4.96□□□□□ -1.62
RPA3P35244 TMSB15B-207ENST00000598087 947 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 AC104687.2-201ENST00000604442 342 ntBASIC4.96□□□□□ -1.62
RPA3P35244 SNORD91B-202ENST00000608459 222 ntBASIC4.96□□□□□ -1.62
RPA3P35244 AL356056.1-205ENST00000608904 651 ntTSL 5 BASIC4.96□□□□□ -1.62
RPA3P35244 AC009163.6-201ENST00000612367 342 ntBASIC4.96□□□□□ -1.62
RPA3P35244 DAOA-AS1_1.1-201ENST00000613021 201 ntBASIC4.96□□□□□ -1.62
RPA3P35244 OR10X1-201ENST00000623167 981 ntAPPRIS P1 BASIC4.96□□□□□ -1.62
RPA3P35244 LANCL1-204ENST00000441020 4503 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RPA3P35244 ZNF445-201ENST00000396077 18299 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 ABCA13-204ENST00000435803 17184 ntAPPRIS P2 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 LINC01375-201ENST00000428485 1860 ntTSL 2 BASIC4.96□□□□□ -1.62
RPA3P35244 ASB5-201ENST00000296525 3031 ntAPPRIS P1 TSL 1 (best) BASIC4.96□□□□□ -1.62
RPA3P35244 TPTE2-205ENST00000400230 1793 ntAPPRIS P1 TSL 5 BASIC4.96□□□□□ -1.62
RPA3P35244 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.96□□□□□ -1.62
RPA3P35244 DHX9P1-201ENST00000436565 3076 ntBASIC4.95□□□□□ -1.62
RPA3P35244 WDR63-201ENST00000294664 2995 ntAPPRIS P3 TSL 1 (best) BASIC4.95□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 156.3 ms