Protein–RNA interactions for Protein: P31276

HOXC13, Homeobox protein Hox-C13, humanhuman

Predictions only

Length 330 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC13P31276 RYR3-202ENST00000415757 15557 ntAPPRIS ALT2 TSL 2 BASIC5.6□□□□□ -1.51
HOXC13P31276 ZNF486-201ENST00000335117 3837 ntAPPRIS P1 TSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 KBTBD8-201ENST00000417314 4680 ntAPPRIS P1 TSL 2 BASIC5.6□□□□□ -1.51
HOXC13P31276 AC090971.4-201ENST00000560291 1800 ntBASIC5.6□□□□□ -1.51
HOXC13P31276 PRDM2-206ENST00000413440 6175 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 ZNF493-202ENST00000355504 4386 ntTSL 1 (best) BASIC5.6□□□□□ -1.51
HOXC13P31276 CTAGE5-219ENST00000640607 4239 ntAPPRIS P5 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 ANO3-202ENST00000525139 3257 ntAPPRIS ALT1 TSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 LINC02397-201ENST00000504409 10626 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 MYB-226ENST00000528774 2277 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 PIAS2-204ENST00000585916 11075 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 PHC3-217ENST00000497658 2087 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 ADAM7-202ENST00000380789 3358 ntAPPRIS ALT2 TSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 GCSAML-206ENST00000527084 1308 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 LCA5L-218ENST00000485895 2551 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 IGLV4-3-201ENST00000390318 403 ntAPPRIS P1 BASIC5.59□□□□□ -1.51
HOXC13P31276 CYB5AP4-201ENST00000396692 399 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 Z86062.2-201ENST00000411442 380 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 AC096669.1-202ENST00000413708 616 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC13P31276 YY1P1-201ENST00000427625 668 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 AL049745.1-201ENST00000433953 286 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC13P31276 AL359265.1-201ENST00000440296 795 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 CEACAMP7-201ENST00000444105 496 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 AC114877.1-201ENST00000446601 582 ntTSL 4 BASIC5.59□□□□□ -1.51
HOXC13P31276 LINC00448-202ENST00000448411 433 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC13P31276 RPS29P33-201ENST00000456717 146 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 PANCR-201ENST00000503456 493 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 AC010261.2-201ENST00000515563 588 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC13P31276 AP001001.1-202ENST00000527594 692 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC13P31276 OR5D15P-201ENST00000531671 942 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 AC107918.3-201ENST00000533272 382 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 MIR3908-201ENST00000579798 126 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 AC015845.1-202ENST00000580184 242 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC13P31276 AC011840.5-201ENST00000582125 771 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 AP005121.1-202ENST00000584414 555 ntTSL 2 BASIC5.59□□□□□ -1.51
HOXC13P31276 AC245128.3-201ENST00000594721 748 ntBASIC5.59□□□□□ -1.51
HOXC13P31276 ERVK-28-203ENST00000600419 457 ntTSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 ZNF630-AS1-201ENST00000614448 397 ntTSL 3 BASIC5.59□□□□□ -1.51
HOXC13P31276 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 AC097495.1-201ENST00000637675 546 ntAPPRIS P1 TSL 5 BASIC5.59□□□□□ -1.51
HOXC13P31276 DYNC1I2-225ENST00000508530 2494 ntAPPRIS ALT1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 ZNF571-203ENST00000451802 2265 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.51
HOXC13P31276 CCR2-202ENST00000400888 2232 ntTSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC13P31276 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC5.59□□□□□ -1.52
HOXC13P31276 DYNC1I2-207ENST00000410079 2159 ntTSL 2 BASIC5.59□□□□□ -1.52
HOXC13P31276 NADK2-203ENST00000397338 3614 ntTSL 2 BASIC5.59□□□□□ -1.52
HOXC13P31276 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC5.58□□□□□ -1.52
HOXC13P31276 FOXN2-203ENST00000616844 1414 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC13P31276 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC015799.1-201ENST00000622996 3122 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 CCDC62-205ENST00000537566 3537 ntAPPRIS ALT2 TSL 2 BASIC5.58□□□□□ -1.52
HOXC13P31276 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC5.58□□□□□ -1.52
HOXC13P31276 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC13P31276 DUSP19-202ENST00000354221 5176 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC13P31276 HIST1H2BD-201ENST00000289316 789 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC13P31276 LINC00867-202ENST00000415417 488 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 OXSM-202ENST00000420173 1256 ntTSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC13P31276 AC009784.1-201ENST00000426484 460 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 AL772161.1-201ENST00000439130 476 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 AL450263.2-201ENST00000439400 589 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 CLEC5A-203ENST00000439991 501 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 TXNP2-201ENST00000443918 295 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC13P31276 GAPDHP25-201ENST00000447061 1001 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 AC073850.1-201ENST00000449243 255 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 AL389915.2-201ENST00000454576 441 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 TPPP2-202ENST00000460647 568 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC015864.1-201ENST00000496512 544 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 LINC02502-201ENST00000505122 642 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 LINC02234-202ENST00000513288 705 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC040914.1-201ENST00000518674 318 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 IGHVIII-38-1-201ENST00000521454 282 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 AC115837.2-201ENST00000522127 677 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 SNHG1-205ENST00000537869 1038 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC039056.1-201ENST00000552704 467 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 LINC00687-203ENST00000558175 696 ntTSL 3 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC087477.3-201ENST00000559214 552 ntTSL 4 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC008738.1-201ENST00000590117 375 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC13P31276 AC100814.1-201ENST00000606963 623 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 AC020658.4-201ENST00000613987 684 ntBASIC5.58□□□□□ -1.52
HOXC13P31276 AP2B1-222ENST00000628168 192 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC13P31276 ZNF431-201ENST00000311048 13894 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC13P31276 DDX58-201ENST00000379868 4089 ntTSL 5 BASIC5.58□□□□□ -1.52
HOXC13P31276 PLEKHA1-203ENST00000368990 14010 ntAPPRIS P1 TSL 1 (best) BASIC5.58□□□□□ -1.52
HOXC13P31276 ALKBH3-AS1-201ENST00000499194 1906 ntTSL 2 BASIC5.58□□□□□ -1.52
HOXC13P31276 KIAA0408-204ENST00000483725 3284 ntAPPRIS P2 TSL 5 BASIC5.57□□□□□ -1.52
HOXC13P31276 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC13P31276 DECR1-215ENST00000522161 1766 ntAPPRIS ALT2 TSL 2 BASIC5.57□□□□□ -1.52
HOXC13P31276 GRIA3-207ENST00000620443 4943 ntAPPRIS ALT1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC13P31276 WDR12-201ENST00000261015 8100 ntAPPRIS P1 TSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC13P31276 NSD1-201ENST00000347982 7688 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC13P31276 PLCH1-AS1-201ENST00000475196 1308 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
HOXC13P31276 EOGT-209ENST00000540955 1332 ntTSL 2 BASIC5.57□□□□□ -1.52
HOXC13P31276 MAP3K7-203ENST00000369327 4558 ntTSL 1 (best) BASIC5.57□□□□□ -1.52
Retrieved 100 of 98,524 protein–RNA pairs in 77.7 ms