Protein–RNA interactions for Protein: P19447

ERCC3, TFIIH basal transcription factor complex helicase XPB subunit, humanhuman

Predictions only

Length 782 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC3P19447 RPP40P1-201ENST00000426762 456 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AP001599.1-201ENST00000426771 361 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC003989.1-201ENST00000434569 565 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC242426.1-201ENST00000435270 960 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC068533.3-201ENST00000435524 404 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 GTF3AP5-201ENST00000442645 697 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AL139275.1-201ENST00000447315 824 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 AC009961.3-201ENST00000449832 765 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 TPTE2P5-203ENST00000458118 728 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC084754.1-201ENST00000463466 464 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 L3HYPDH-206ENST00000487285 700 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 SETP14-201ENST00000497538 873 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC104090.1-201ENST00000506341 1171 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 MTND1P22-201ENST00000510572 951 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC011405.1-204ENST00000512875 731 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC093879.2-201ENST00000513645 427 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 IGHV4-55-201ENST00000520889 368 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC027026.1-201ENST00000532323 742 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC005832.3-201ENST00000537929 631 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 NPIPB1P-201ENST00000547442 1129 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC079905.1-201ENST00000549280 475 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC004825.1-201ENST00000555068 586 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC244502.3-201ENST00000555460 457 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC127522.1-201ENST00000560531 751 ntTSL 2 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC018558.1-201ENST00000562591 459 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 MMP2-AS1-201ENST00000565307 593 ntTSL 4 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC007496.1-201ENST00000565641 739 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC117569.1-201ENST00000584482 739 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 MIR4999-201ENST00000585029 91 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 SATB1-AS1-222ENST00000600177 751 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 ZNF675-208ENST00000601010 669 ntTSL 5 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC135507.1-201ENST00000607214 561 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 Metazoa_SRP.179-201ENST00000619020 241 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC092683.1-207ENST00000620051 837 ntTSL 2 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC024884.1-201ENST00000620583 399 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 MRPL57P1-201ENST00000621486 265 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC016717.3-201ENST00000624730 554 ntBASIC7.34□□□□□ -1.23
ERCC3P19447 AC244517.7-201ENST00000625144 398 ntTSL 3 BASIC7.34□□□□□ -1.23
ERCC3P19447 CYP3A5-201ENST00000222982 1720 ntAPPRIS P1 TSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 IL1RL1-202ENST00000311734 3994 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 VEPH1-202ENST00000392832 3044 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
ERCC3P19447 KCNJ1-203ENST00000392664 1674 ntTSL 1 (best) BASIC7.34□□□□□ -1.23
ERCC3P19447 C11orf54-206ENST00000528099 1862 ntAPPRIS P1 TSL 2 BASIC7.34□□□□□ -1.23
ERCC3P19447 AC100858.3-201ENST00000533516 1605 ntTSL 5 BASIC7.34□□□□□ -1.24
ERCC3P19447 BPESC1-201ENST00000418282 3522 ntTSL 1 (best) BASIC7.34□□□□□ -1.24
ERCC3P19447 CCDC150-202ENST00000409270 2243 ntAPPRIS ALT2 TSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 EEF1A1P9-201ENST00000514975 1383 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 IL20-202ENST00000367098 1553 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 GYPA-214ENST00000641688 1764 ntAPPRIS ALT2 BASIC7.33□□□□□ -1.24
ERCC3P19447 TMC1-201ENST00000297784 3201 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 GLRA2-204ENST00000443437 3182 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 MOB4-201ENST00000233892 3785 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 PCYT1A-204ENST00000419333 1325 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 FGFR2-218ENST00000478859 3990 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 RAP1GDS1-204ENST00000408900 1942 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 OR2T5-201ENST00000641363 2525 ntAPPRIS P1 BASIC7.33□□□□□ -1.24
ERCC3P19447 NOP10-201ENST00000328848 554 ntAPPRIS P1 TSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 RNA5SP110-201ENST00000362638 115 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 RN7SKP149-201ENST00000363008 344 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 RNU6-253P-201ENST00000384730 105 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 RNU2-42P-201ENST00000410697 113 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 LINC00427-201ENST00000412722 430 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 SLC8A1-AS1-202ENST00000417875 344 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 AC092687.1-201ENST00000418835 389 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 AL451127.1-201ENST00000422909 624 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 AL158154.1-201ENST00000427387 465 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 RPS24P8-201ENST00000431490 402 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 AL590502.1-201ENST00000433019 505 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 TXNP5-201ENST00000441043 315 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 AL591848.2-201ENST00000442712 522 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 AL161937.1-201ENST00000444478 425 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 PPIAP27-201ENST00000453800 265 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 LINC00894-208ENST00000455777 284 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 LINC01072-201ENST00000455848 431 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 LINC02173-201ENST00000504132 521 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 AC083906.1-201ENST00000509298 406 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 OR4D12P-201ENST00000509361 911 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 MGC32805-204ENST00000509993 783 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 GYPB-213ENST00000513128 360 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 AC116424.1-203ENST00000513940 671 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 MTND4LP31-201ENST00000514859 294 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 AC091987.1-201ENST00000517758 464 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 AC020937.1-201ENST00000519677 1013 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 IGKV2-36-201ENST00000519999 223 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 AP003306.1-201ENST00000529875 353 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 EIF4A2P5-201ENST00000529914 499 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 PARPBP-209ENST00000537257 976 ntTSL 1 (best) BASIC7.33□□□□□ -1.24
ERCC3P19447 MORF4L1-205ENST00000558502 855 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 GTF2IP8-201ENST00000560687 584 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 AC009087.1-201ENST00000561827 369 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 AC099511.1-201ENST00000564561 590 ntTSL 2 BASIC7.33□□□□□ -1.24
ERCC3P19447 AL136084.2-213ENST00000585704 690 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 AL136084.2-212ENST00000589976 654 ntTSL 5 BASIC7.33□□□□□ -1.24
ERCC3P19447 AC012313.4-201ENST00000596296 495 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 AC010422.4-201ENST00000601420 533 ntTSL 3 BASIC7.33□□□□□ -1.24
ERCC3P19447 CLPTM1LP1-201ENST00000604519 484 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 AL390816.3-201ENST00000604527 1066 ntBASIC7.33□□□□□ -1.24
ERCC3P19447 AL008729.1-201ENST00000606627 553 ntTSL 4 BASIC7.33□□□□□ -1.24
Retrieved 100 of 98,524 protein–RNA pairs in 80 ms