Protein–RNA interactions for Protein: P18858

LIG1, DNA ligase 1, humanhuman

Predictions only

Length 919 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LIG1P18858 AC112255.1-201ENST00000624070 2493 ntBASIC7.19□□□□□ -1.26
LIG1P18858 FRMD6-205ENST00000554167 4176 ntTSL 2 BASIC7.19□□□□□ -1.26
LIG1P18858 PUM1-207ENST00000440538 3936 ntTSL 1 (best) BASIC7.19□□□□□ -1.26
LIG1P18858 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC7.19□□□□□ -1.26
LIG1P18858 AC073429.2-201ENST00000569694 1444 ntBASIC7.18□□□□□ -1.26
LIG1P18858 TESPA1-212ENST00000532804 2000 ntAPPRIS ALT2 TSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 FAM205BP-203ENST00000455647 3752 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 PUS3-203ENST00000530811 1792 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 LINC01152-201ENST00000472655 3578 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 ZNF644-204ENST00000370440 5702 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 CYP3A43-201ENST00000222382 1515 ntAPPRIS P4 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 ELAVL4-202ENST00000371819 2467 ntAPPRIS ALT1 TSL 2 BASIC7.18□□□□□ -1.26
LIG1P18858 UGT2B24P-201ENST00000514441 1597 ntBASIC7.18□□□□□ -1.26
LIG1P18858 Y_RNA.465-201ENST00000384293 102 ntBASIC7.18□□□□□ -1.26
LIG1P18858 Y_RNA.560-201ENST00000384689 102 ntBASIC7.18□□□□□ -1.26
LIG1P18858 MIR433-201ENST00000384837 93 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC245036.1-201ENST00000391727 309 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC003045.1-201ENST00000398779 713 ntBASIC7.18□□□□□ -1.26
LIG1P18858 ZNF603P-201ENST00000405613 487 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AL133260.1-201ENST00000405720 405 ntBASIC7.18□□□□□ -1.26
LIG1P18858 BTF3P9-201ENST00000418784 283 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC015977.1-201ENST00000418887 292 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AL139184.1-202ENST00000422303 222 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC083862.1-201ENST00000427378 1242 ntBASIC7.18□□□□□ -1.26
LIG1P18858 ETF1P3-201ENST00000430422 1160 ntBASIC7.18□□□□□ -1.26
LIG1P18858 OFD1P13Y-201ENST00000431179 1232 ntBASIC7.18□□□□□ -1.26
LIG1P18858 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC7.18□□□□□ -1.26
LIG1P18858 RPL32-206ENST00000435983 620 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
LIG1P18858 AL020997.1-201ENST00000446554 349 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AL161912.1-201ENST00000448475 524 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 SUMO2P2-201ENST00000456482 255 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AL021393.1-201ENST00000456740 539 ntTSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 AL355032.1-201ENST00000472981 438 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC098818.1-201ENST00000478593 252 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AL035690.1-201ENST00000490892 383 ntBASIC7.18□□□□□ -1.26
LIG1P18858 RPS6P4-201ENST00000494693 758 ntBASIC7.18□□□□□ -1.26
LIG1P18858 DUBR-205ENST00000495228 411 ntTSL 2 BASIC7.18□□□□□ -1.26
LIG1P18858 AC124893.1-201ENST00000496247 545 ntTSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 AC008591.1-201ENST00000503616 631 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 SERF1B-203ENST00000503931 569 ntTSL 4 BASIC7.18□□□□□ -1.26
LIG1P18858 AC105924.1-201ENST00000504057 339 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 SERF1A-204ENST00000504458 569 ntTSL 4 BASIC7.18□□□□□ -1.26
LIG1P18858 APOBEC3AP1-201ENST00000511396 287 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC010285.3-201ENST00000511668 676 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC093816.1-201ENST00000515076 913 ntBASIC7.18□□□□□ -1.26
LIG1P18858 NSMCE2-202ENST00000517315 996 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 MTCYBP19-201ENST00000517463 1124 ntBASIC7.18□□□□□ -1.26
LIG1P18858 NAP1L1P1-201ENST00000524793 1063 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AP000873.5-201ENST00000533906 236 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC007207.2-201ENST00000543206 542 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 AC034102.2-201ENST00000548861 489 ntAPPRIS P1 TSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 PPFIA2-AS1-205ENST00000550938 790 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 AC136619.2-201ENST00000563361 631 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC027104.1-201ENST00000563702 681 ntBASIC7.18□□□□□ -1.26
LIG1P18858 CASC16-202ENST00000563844 610 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 LINC01633-201ENST00000566476 1091 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 AC008741.1-201ENST00000569456 510 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 ISCA1P3-201ENST00000577104 373 ntBASIC7.18□□□□□ -1.26
LIG1P18858 HAUS1-203ENST00000585518 506 ntTSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 Z98949.1-204ENST00000595102 731 ntTSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 AC108747.1-201ENST00000609508 535 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC015922.4-201ENST00000612568 690 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AL391095.2-201ENST00000615228 378 ntTSL 3 BASIC7.18□□□□□ -1.26
LIG1P18858 MIR6085-201ENST00000618314 110 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC009509.4-201ENST00000619202 509 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AC093648.1-201ENST00000623546 606 ntBASIC7.18□□□□□ -1.26
LIG1P18858 ABCA9-AS1-203ENST00000627596 426 ntTSL 5 BASIC7.18□□□□□ -1.26
LIG1P18858 FAM205A-201ENST00000378788 4225 ntAPPRIS P1 TSL 2 BASIC7.18□□□□□ -1.26
LIG1P18858 ATP5A1P4-201ENST00000556888 1605 ntBASIC7.18□□□□□ -1.26
LIG1P18858 MTND5P23-201ENST00000430812 1655 ntBASIC7.18□□□□□ -1.26
LIG1P18858 NEPNP-201ENST00000404786 1371 ntBASIC7.18□□□□□ -1.26
LIG1P18858 AFM-201ENST00000226355 2059 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 FYB2-201ENST00000343433 3135 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 ZNF521-201ENST00000361524 4871 ntAPPRIS P1 TSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 UTP15-208ENST00000543251 4922 ntTSL 2 BASIC7.18□□□□□ -1.26
LIG1P18858 CAP1P2-201ENST00000417455 1409 ntBASIC7.18□□□□□ -1.26
LIG1P18858 VEPH1-205ENST00000468233 1401 ntTSL 1 (best) BASIC7.18□□□□□ -1.26
LIG1P18858 ZNF566-202ENST00000424129 2644 ntAPPRIS P3 TSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 RYR2-201ENST00000360064 14850 ntAPPRIS ALT2 TSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 SREK1IP1-204ENST00000513458 6876 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 AC022164.1-201ENST00000568767 2673 ntBASIC7.17□□□□□ -1.26
LIG1P18858 RACGAP1-203ENST00000454520 3080 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 ADGRL2-202ENST00000359929 4674 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 ZNF568-214ENST00000616085 3542 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 ELMO1-207ENST00000442504 3154 ntAPPRIS P1 TSL 2 BASIC7.17□□□□□ -1.26
LIG1P18858 SELENOI-205ENST00000613142 8126 ntAPPRIS ALT1 TSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 SLC26A5-208ENST00000393730 2498 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 AL161912.4-201ENST00000623889 2468 ntBASIC7.17□□□□□ -1.26
LIG1P18858 AL133284.1-201ENST00000423715 4996 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 TLR6-201ENST00000381950 2938 ntAPPRIS P1 BASIC7.17□□□□□ -1.26
LIG1P18858 DCN-218ENST00000551354 2924 ntTSL 3 BASIC7.17□□□□□ -1.26
LIG1P18858 MEIOB-201ENST00000325962 1694 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 GTDC1-204ENST00000392869 10514 ntAPPRIS P1 TSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 PSMA6-201ENST00000261479 1029 ntAPPRIS P2 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 RNA5SP77-201ENST00000365394 120 ntBASIC7.17□□□□□ -1.26
LIG1P18858 CFHR1-202ENST00000367424 1070 ntTSL 5 BASIC7.17□□□□□ -1.26
LIG1P18858 LINC00474-201ENST00000374014 769 ntTSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 ADPRM-201ENST00000379774 1209 ntAPPRIS P1 TSL 1 (best) BASIC7.17□□□□□ -1.26
LIG1P18858 RNY3P14-201ENST00000384309 102 ntBASIC7.17□□□□□ -1.26
Retrieved 100 of 98,524 protein–RNA pairs in 94.4 ms