Protein–RNA interactions for Protein: P16619

CCL3L1, C-C motif chemokine 3-like 1, humanhuman

Predictions only

Length 93 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL3L1P16619 AC005899.7-201ENST00000618199 588 ntBASIC4□□□□□ -1.77
CCL3L1P16619 AC063952.1-203ENST00000634410 658 ntBASIC4□□□□□ -1.77
CCL3L1P16619 ADAM18-201ENST00000265707 2388 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
CCL3L1P16619 PCDH15-209ENST00000395433 6942 ntTSL 5 BASIC4□□□□□ -1.77
CCL3L1P16619 AC016705.1-201ENST00000548231 1891 ntTSL 5 BASIC4□□□□□ -1.77
CCL3L1P16619 ARHGAP5-210ENST00000556611 4824 ntAPPRIS ALT1 TSL 5 BASIC4□□□□□ -1.77
CCL3L1P16619 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL3L1P16619 KLHL4-202ENST00000373119 5818 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
CCL3L1P16619 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
CCL3L1P16619 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC4□□□□□ -1.77
CCL3L1P16619 LINC01981-201ENST00000432163 2833 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC245407.1-201ENST00000621489 2538 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC234781.1-202ENST00000412436 1329 ntTSL 5 BASIC3.99□□□□□ -1.77
CCL3L1P16619 ZNF23-207ENST00000564528 3020 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
CCL3L1P16619 CSMD3-201ENST00000297405 13212 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC3.99□□□□□ -1.77
CCL3L1P16619 ZFAND6-213ENST00000559835 1446 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 GNAS-202ENST00000306090 477 ntTSL 5 BASIC3.99□□□□□ -1.77
CCL3L1P16619 OR5AS1-201ENST00000313555 975 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
CCL3L1P16619 RNA5SP191-201ENST00000362585 102 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 RN7SKP125-201ENST00000410481 302 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 MGAT2P2-201ENST00000427194 797 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 AC104837.2-201ENST00000427236 424 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 VN1R54P-201ENST00000435210 1049 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 BTF3P6-201ENST00000448054 499 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 OTX2P1-201ENST00000450956 354 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 LINC00601-201ENST00000456514 1168 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL3L1P16619 RPS3AP41-201ENST00000462701 778 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 AC063943.1-201ENST00000465434 453 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 AC008410.1-201ENST00000483777 339 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 PPP1R11P1-201ENST00000486095 376 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 F11-AS1-201ENST00000505103 1178 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC011389.1-201ENST00000509170 594 ntTSL 4 BASIC3.99□□□□□ -1.77
CCL3L1P16619 ENPP7P9-201ENST00000514456 627 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 Y_RNA.719-201ENST00000517156 106 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 RNU6-709P-201ENST00000517257 104 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 LDHC-205ENST00000537486 583 ntTSL 5 BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC079907.2-202ENST00000547004 423 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC084200.1-201ENST00000547370 547 ntTSL 4 BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC142086.4-201ENST00000568904 650 ntTSL 3 BASIC3.99□□□□□ -1.77
CCL3L1P16619 CYCSP40-201ENST00000575927 294 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 MIR3934-201ENST00000579806 107 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 AC007497.1-201ENST00000610421 561 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 C7orf77-201ENST00000616258 548 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 AC107068.1-201ENST00000563286 4218 ntBASIC3.99□□□□□ -1.77
CCL3L1P16619 ASTE1-208ENST00000514044 2504 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 SLC4A10-206ENST00000446997 5551 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 SLC1A3-216ENST00000613445 4030 ntTSL 5 BASIC3.99□□□□□ -1.77
CCL3L1P16619 LINC00032-203ENST00000640247 1374 ntTSL 5 BASIC3.99□□□□□ -1.77
CCL3L1P16619 ATF7IP-209ENST00000536444 8774 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 C3orf58-202ENST00000441925 3260 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL3L1P16619 FAM184A-204ENST00000368475 3392 ntTSL 2 BASIC3.99□□□□□ -1.77
CCL3L1P16619 OSBPL11-201ENST00000296220 4191 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
CCL3L1P16619 SLC9C1-201ENST00000305815 4172 ntAPPRIS P3 TSL 2 BASIC3.99□□□□□ -1.77
CCL3L1P16619 ITCH-201ENST00000262650 3089 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCL3L1P16619 ERGIC2-201ENST00000360150 5014 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL3L1P16619 SPAG6-209ENST00000538630 2376 ntTSL 5 BASIC3.98□□□□□ -1.77
CCL3L1P16619 ZZZ3-202ENST00000370801 4328 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL3L1P16619 C1orf112-202ENST00000359326 4002 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL3L1P16619 AC083837.1-201ENST00000565297 2994 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 FAP-203ENST00000443424 2598 ntTSL 2 BASIC3.98□□□□□ -1.77
CCL3L1P16619 GLYAT-201ENST00000278400 1150 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
CCL3L1P16619 RN7SKP149-201ENST00000363008 344 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 BANF2-202ENST00000377805 444 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
CCL3L1P16619 U3.30-201ENST00000391308 210 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AL020994.2-201ENST00000413244 571 ntTSL 4 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AL132796.1-201ENST00000421617 479 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 RGS17P1-201ENST00000423358 553 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 OR2B7P-201ENST00000429302 934 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 TNKS2-AS1-201ENST00000432246 609 ntTSL 2 BASIC3.98□□□□□ -1.77
CCL3L1P16619 KATNBL1P2-201ENST00000433311 835 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 RPL31P44-201ENST00000447680 377 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AC114814.3-201ENST00000449362 663 ntTSL 2 BASIC3.98□□□□□ -1.77
CCL3L1P16619 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AC017101.1-201ENST00000453665 571 ntTSL 4 BASIC3.98□□□□□ -1.77
CCL3L1P16619 RPS3AP53-201ENST00000454716 778 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AURKAPS2-201ENST00000454983 333 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AC090686.1-201ENST00000481577 749 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 RN7SL558P-201ENST00000497468 299 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AC096773.1-201ENST00000506852 648 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AC104119.1-201ENST00000508829 339 ntTSL 5 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AC139722.1-201ENST00000512502 782 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 UBE2Q2P10-201ENST00000514854 900 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 RNA5SP249-201ENST00000516127 99 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AC246817.2-206ENST00000520570 582 ntTSL 4 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AP006245.2-201ENST00000522004 300 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 HNRNPRP2-201ENST00000528421 743 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AP002815.1-201ENST00000533740 386 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 EDDM3DP-201ENST00000554692 434 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 AC007448.1-201ENST00000582714 234 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 MIR7515HG-226ENST00000588330 1055 ntTSL 5 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC3.98□□□□□ -1.77
CCL3L1P16619 INTS6-AS1-226ENST00000610018 672 ntTSL 5 BASIC3.98□□□□□ -1.77
CCL3L1P16619 PRKCQ-AS1-218ENST00000624974 1132 ntTSL 5 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AJ009632.2-203ENST00000634708 1205 ntTSL 5 BASIC3.98□□□□□ -1.77
CCL3L1P16619 AP000473.2-201ENST00000602659 1537 ntBASIC3.98□□□□□ -1.77
CCL3L1P16619 GABRA2-211ENST00000514090 3401 ntAPPRIS P1 TSL 5 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 92.1 ms