Protein–RNA interactions for Protein: P12110

COL6A2, Collagen alpha-2(VI) chain, humanhuman

Predictions only

Length 1,019 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2P12110 CRYZL1-217ENST00000445393 824 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 AL133319.1-201ENST00000447848 777 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 PPIAP32-201ENST00000449940 472 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 RN7SL352P-201ENST00000466002 277 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 CCDC75P1-201ENST00000469247 791 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC068633.1-202ENST00000476460 458 ntTSL 2 BASIC6.12□□□□□ -1.43
COL6A2P12110 GAPDHP36-201ENST00000480688 918 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 POGZ-213ENST00000491586 4130 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 RAB7A-208ENST00000493186 329 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 AC092045.1-201ENST00000495716 1231 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC124242.1-202ENST00000499554 1052 ntTSL 3 BASIC6.12□□□□□ -1.43
COL6A2P12110 AC009567.2-201ENST00000502989 349 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 EEF1A1P21-201ENST00000512363 1344 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 MRPS5P3-201ENST00000515577 166 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 FBXO16-207ENST00000518734 995 ntAPPRIS ALT2 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 COX6C-210ENST00000524245 513 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL6A2P12110 OR5AZ1P-201ENST00000527448 943 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC087623.1-201ENST00000533301 377 ntTSL 3 BASIC6.12□□□□□ -1.43
COL6A2P12110 AP001858.2-201ENST00000536213 601 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 NR1H4-204ENST00000546380 565 ntTSL 3 BASIC6.12□□□□□ -1.43
COL6A2P12110 AC044913.1-201ENST00000557200 430 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC138207.5-201ENST00000579561 409 ntTSL 3 BASIC6.12□□□□□ -1.43
COL6A2P12110 MIR4666A-201ENST00000580160 79 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 ZNF415P1-201ENST00000582279 1166 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC005537.1-201ENST00000588324 1238 ntTSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 AC092316.1-201ENST00000598703 297 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 AP003465.2-201ENST00000602571 373 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 AC026786.2-201ENST00000606110 392 ntTSL 3 BASIC6.12□□□□□ -1.43
COL6A2P12110 LINC02112-203ENST00000606169 419 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 CSNK1G1-204ENST00000606793 1658 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 LINC01320-206ENST00000607437 528 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 WDR11-AS1-204ENST00000608667 522 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 TOR1AIP2-206ENST00000609928 4364 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL6A2P12110 AC121761.2-201ENST00000617300 689 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 CT45A6-202ENST00000620654 878 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 AL137067.2-201ENST00000621202 131 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 RBM12B-AS1-201ENST00000623283 653 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 MVP-219ENST00000629059 120 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 LINC00862-204ENST00000637098 1400 ntTSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 CASC19-281ENST00000642118 1554 ntBASIC6.12□□□□□ -1.43
COL6A2P12110 CUBN-202ENST00000377833 11949 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 RAB30-216ENST00000612684 9783 ntAPPRIS P1 TSL 3 BASIC6.12□□□□□ -1.43
COL6A2P12110 LRRC7-202ENST00000310961 6507 ntAPPRIS ALT2 TSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 TTC21B-201ENST00000243344 5482 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 FGL2-201ENST00000248598 4261 ntAPPRIS P1 TSL 1 (best) BASIC6.12□□□□□ -1.43
COL6A2P12110 PPIAL4G-201ENST00000419275 3856 ntAPPRIS P1 BASIC6.12□□□□□ -1.43
COL6A2P12110 ESF1-201ENST00000202816 3216 ntAPPRIS P1 TSL 5 BASIC6.12□□□□□ -1.43
COL6A2P12110 AC008695.1-201ENST00000514667 6393 ntAPPRIS P1 TSL 2 BASIC6.12□□□□□ -1.43
COL6A2P12110 RIMS1-219ENST00000523963 3097 ntTSL 2 BASIC6.12□□□□□ -1.43
COL6A2P12110 TERB1-203ENST00000558713 2257 ntAPPRIS P1 TSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 STAG2-202ENST00000371144 4281 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 OR2A12-202ENST00000641592 4163 ntAPPRIS P1 BASIC6.11□□□□□ -1.43
COL6A2P12110 ANKRD31-203ENST00000506364 6207 ntAPPRIS ALT2 TSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 PLEKHA5-216ENST00000540972 1954 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 SLC16A6-201ENST00000327268 3807 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 ZNF449-201ENST00000339249 3773 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 MCM8-201ENST00000265187 3442 ntAPPRIS ALT2 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 NOL8-221ENST00000542053 3393 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 MTND5P23-201ENST00000430812 1655 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 LRRC37A3-204ENST00000400877 3273 ntTSL 2 BASIC6.11□□□□□ -1.43
COL6A2P12110 AP005435.3-201ENST00000531260 3198 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 C15orf54-202ENST00000625107 3078 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 RGS13-201ENST00000391995 1505 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 GTF2H1-204ENST00000524753 1510 ntTSL 3 BASIC6.11□□□□□ -1.43
COL6A2P12110 CLVS1-203ENST00000518592 2880 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 OFD1P15Y-201ENST00000411536 1392 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC6.11□□□□□ -1.43
COL6A2P12110 CALN1-203ENST00000395276 9189 ntAPPRIS P3 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 LDHC-201ENST00000280704 1256 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 NPM1-202ENST00000351986 1237 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 RNU1-49P-201ENST00000363468 159 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 RNU6-707P-201ENST00000364647 95 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 RNU4-7P-201ENST00000364758 141 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 DFNB59-201ENST00000375129 1202 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 EEF1AKMT1-201ENST00000382754 875 ntAPPRIS P1 TSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 RNU6-452P-201ENST00000384406 107 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 SNORA7A-201ENST00000384765 139 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 RN7SKP121-201ENST00000410842 305 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC004022.2-201ENST00000413824 193 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AL359633.2-201ENST00000415787 622 ntTSL 1 (best) BASIC6.11□□□□□ -1.43
COL6A2P12110 PCDH9-AS2-201ENST00000419371 538 ntTSL 3 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC006366.1-201ENST00000422002 759 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 RPS7P14-201ENST00000426405 583 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 C8orf59P1-201ENST00000429930 303 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AC017002.1-201ENST00000432268 881 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 MTCO1P52-201ENST00000433928 531 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 LINC01680-201ENST00000434983 299 ntTSL 2 BASIC6.11□□□□□ -1.43
COL6A2P12110 PPIAP10-201ENST00000438675 458 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 MIR205HG-206ENST00000440276 539 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 LINC02384-202ENST00000441255 567 ntTSL 4 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC005002.1-201ENST00000447458 540 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 AP000470.1-201ENST00000448063 693 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC009518.1-201ENST00000452219 559 ntTSL 4 BASIC6.11□□□□□ -1.43
COL6A2P12110 NPM1P9-201ENST00000453156 844 ntBASIC6.11□□□□□ -1.43
COL6A2P12110 SUN3-208ENST00000453192 801 ntTSL 5 BASIC6.11□□□□□ -1.43
COL6A2P12110 AC010149.1-201ENST00000455357 571 ntTSL 4 BASIC6.11□□□□□ -1.43
COL6A2P12110 AL031275.1-201ENST00000457405 418 ntTSL 3 BASIC6.11□□□□□ -1.43
COL6A2P12110 PSMC1P13-201ENST00000458195 985 ntBASIC6.11□□□□□ -1.43
Retrieved 100 of 98,524 protein–RNA pairs in 121.1 ms