Protein–RNA interactions for Protein: P11388

TOP2A, DNA topoisomerase 2-alpha, humanhuman

Known RBP Predictions only

Length 1,531 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TOP2AP11388 RNA5SP464-201ENST00000516251 108 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 CYCSP29-201ENST00000533731 318 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 AGGF1P9-201ENST00000561884 913 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 AC084783.1-201ENST00000565846 910 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 AC006504.2-201ENST00000589471 458 ntTSL 3 BASIC8.35□□□□□ -1.07
TOP2AP11388 AL049536.1-201ENST00000625043 744 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 PTPN3-202ENST00000374541 6703 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
TOP2AP11388 OSER1-202ENST00000372970 1616 ntAPPRIS P1 TSL 3 BASIC8.35□□□□□ -1.07
TOP2AP11388 ADAMTS9-AS1-203ENST00000471990 1606 ntTSL 2 BASIC8.35□□□□□ -1.07
TOP2AP11388 ZBTB38-222ENST00000637056 6056 ntAPPRIS P1 TSL 5 BASIC8.35□□□□□ -1.07
TOP2AP11388 ZC3H12C-202ENST00000453089 9542 ntTSL 2 BASIC8.35□□□□□ -1.07
TOP2AP11388 ZNF137P-201ENST00000456718 1920 ntBASIC8.35□□□□□ -1.07
TOP2AP11388 OR1A1-202ENST00000641322 3743 ntAPPRIS P1 BASIC8.34□□□□□ -1.07
TOP2AP11388 SNORA71.2-201ENST00000364941 134 ntBASIC8.34□□□□□ -1.07
TOP2AP11388 AC098872.1-201ENST00000413304 543 ntTSL 3 BASIC8.34□□□□□ -1.07
TOP2AP11388 AC136489.1-201ENST00000438181 717 ntTSL 3 BASIC8.34□□□□□ -1.07
TOP2AP11388 AC090058.1-201ENST00000498788 435 ntBASIC8.34□□□□□ -1.07
TOP2AP11388 Y_RNA.719-201ENST00000517156 106 ntBASIC8.34□□□□□ -1.07
TOP2AP11388 AC021242.2-201ENST00000522765 454 ntTSL 3 BASIC8.34□□□□□ -1.07
TOP2AP11388 AC134312.3-201ENST00000566155 213 ntTSL 2 BASIC8.34□□□□□ -1.07
TOP2AP11388 MIR3939-201ENST00000582614 106 ntBASIC8.34□□□□□ -1.07
TOP2AP11388 AC021422.1-201ENST00000621212 473 ntBASIC8.34□□□□□ -1.07
TOP2AP11388 AC002044.3-201ENST00000623314 541 ntBASIC8.34□□□□□ -1.07
TOP2AP11388 COL14A1-209ENST00000537875 3119 ntTSL 5 BASIC8.34□□□□□ -1.07
TOP2AP11388 USP9X-201ENST00000324545 12401 ntTSL 5 BASIC8.34□□□□□ -1.07
TOP2AP11388 WDHD1-201ENST00000360586 5996 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TOP2AP11388 LINC01239-202ENST00000436786 2347 ntTSL 2 BASIC8.34□□□□□ -1.07
TOP2AP11388 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC8.34□□□□□ -1.07
TOP2AP11388 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.07
TOP2AP11388 SYT14-206ENST00000537238 5208 ntAPPRIS ALT2 TSL 5 BASIC8.34□□□□□ -1.07
TOP2AP11388 CCDC80-201ENST00000206423 12430 ntAPPRIS P1 TSL 1 (best) BASIC8.34□□□□□ -1.07
TOP2AP11388 NFKBIZ-203ENST00000394054 3787 ntAPPRIS ALT2 TSL 1 (best) BASIC8.34□□□□□ -1.08
TOP2AP11388 NUDT6-202ENST00000339154 1065 ntTSL 1 (best) BASIC8.34□□□□□ -1.08
TOP2AP11388 PRKACB-213ENST00000446538 1112 ntTSL 2 BASIC8.34□□□□□ -1.08
TOP2AP11388 AC068492.1-201ENST00000448672 469 ntTSL 3 BASIC8.34□□□□□ -1.08
TOP2AP11388 AC069061.3-201ENST00000582254 823 ntBASIC8.34□□□□□ -1.08
TOP2AP11388 AC106895.2-201ENST00000511291 1824 ntTSL 3 BASIC8.34□□□□□ -1.08
TOP2AP11388 SLC35A1-201ENST00000369552 1851 ntAPPRIS P1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOP2AP11388 KLHL4-201ENST00000373114 2445 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TOP2AP11388 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC8.33□□□□□ -1.08
TOP2AP11388 SPEF2-202ENST00000356031 5681 ntAPPRIS P2 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOP2AP11388 POLA1-202ENST00000379068 5486 ntAPPRIS ALT2 TSL 5 BASIC8.33□□□□□ -1.08
TOP2AP11388 CALU-203ENST00000479257 2572 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TOP2AP11388 NFATC3-201ENST00000329524 6144 ntTSL 1 (best) BASIC8.33□□□□□ -1.08
TOP2AP11388 BICD1-204ENST00000548411 8811 ntAPPRIS ALT1 TSL 1 (best) BASIC8.33□□□□□ -1.08
TOP2AP11388 RNA5SP453-201ENST00000362503 119 ntBASIC8.33□□□□□ -1.08
TOP2AP11388 AC064875.1-202ENST00000421112 561 ntTSL 4 BASIC8.33□□□□□ -1.08
TOP2AP11388 LINC02527-201ENST00000449069 762 ntTSL 3 BASIC8.33□□□□□ -1.08
TOP2AP11388 OR52E3P-201ENST00000452083 936 ntBASIC8.33□□□□□ -1.08
TOP2AP11388 AC010618.1-201ENST00000469924 477 ntBASIC8.33□□□□□ -1.08
TOP2AP11388 AC090692.1-202ENST00000525363 607 ntTSL 4 BASIC8.33□□□□□ -1.08
TOP2AP11388 AC018558.5-201ENST00000565840 952 ntBASIC8.33□□□□□ -1.08
TOP2AP11388 SNORA74C-1-201ENST00000580726 201 ntBASIC8.33□□□□□ -1.08
TOP2AP11388 AC090948.1-201ENST00000607464 549 ntBASIC8.33□□□□□ -1.08
TOP2AP11388 ANK3-216ENST00000503366 5792 ntAPPRIS ALT2 TSL 2 BASIC8.33□□□□□ -1.08
TOP2AP11388 TLK1-212ENST00000521943 2605 ntTSL 2 BASIC8.32□□□□□ -1.08
TOP2AP11388 ZNF410-211ENST00000555044 2601 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOP2AP11388 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC8.32□□□□□ -1.08
TOP2AP11388 STX3-208ENST00000641815 3236 ntBASIC8.32□□□□□ -1.08
TOP2AP11388 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOP2AP11388 GLYATL1-201ENST00000300079 2068 ntAPPRIS P3 TSL 2 BASIC8.32□□□□□ -1.08
TOP2AP11388 ZBTB25-201ENST00000394715 2094 ntAPPRIS P1 TSL 2 BASIC8.32□□□□□ -1.08
TOP2AP11388 NOL8P1-201ENST00000508336 3529 ntBASIC8.32□□□□□ -1.08
TOP2AP11388 AL033543.1-201ENST00000623440 13454 ntBASIC8.32□□□□□ -1.08
TOP2AP11388 OGT-202ENST00000373719 5461 ntAPPRIS P3 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOP2AP11388 RPL7AP25-201ENST00000423357 805 ntBASIC8.32□□□□□ -1.08
TOP2AP11388 AL162591.2-201ENST00000449634 317 ntBASIC8.32□□□□□ -1.08
TOP2AP11388 IGKV2-30-201ENST00000468494 390 ntAPPRIS P1 BASIC8.32□□□□□ -1.08
TOP2AP11388 EDNRA-204ENST00000506066 1032 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TOP2AP11388 AC005699.1-201ENST00000510095 555 ntTSL 3 BASIC8.32□□□□□ -1.08
TOP2AP11388 AC022784.4-201ENST00000518589 422 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TOP2AP11388 TBCA-207ENST00000520039 157 ntTSL 3 BASIC8.32□□□□□ -1.08
TOP2AP11388 AP003557.1-202ENST00000528978 562 ntTSL 4 BASIC8.32□□□□□ -1.08
TOP2AP11388 LINC02281-201ENST00000549013 375 ntTSL 3 BASIC8.32□□□□□ -1.08
TOP2AP11388 MIR3138-201ENST00000585238 82 ntBASIC8.32□□□□□ -1.08
TOP2AP11388 AP001542.3-201ENST00000587619 527 ntTSL 5 BASIC8.32□□□□□ -1.08
TOP2AP11388 AC092902.2-202ENST00000599350 686 ntTSL 3 BASIC8.32□□□□□ -1.08
TOP2AP11388 AL352984.2-202ENST00000613699 155 ntBASIC8.32□□□□□ -1.08
TOP2AP11388 AC048338.2-201ENST00000623601 684 ntTSL 5 BASIC8.32□□□□□ -1.08
TOP2AP11388 BDNF-210ENST00000438929 4059 ntTSL 1 (best) BASIC8.32□□□□□ -1.08
TOP2AP11388 CACNB4-245ENST00000637284 2423 ntTSL 5 BASIC8.32□□□□□ -1.08
TOP2AP11388 ST6GALNAC3-201ENST00000328299 6861 ntAPPRIS P1 TSL 1 (best) BASIC8.32□□□□□ -1.08
TOP2AP11388 ARHGAP20-206ENST00000533353 6066 ntAPPRIS ALT2 TSL 1 (best) BASIC8.31□□□□□ -1.08
TOP2AP11388 RNASEL-202ENST00000539397 4046 ntTSL 2 BASIC8.31□□□□□ -1.08
TOP2AP11388 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TOP2AP11388 RN7SKP227-201ENST00000364445 330 ntBASIC8.31□□□□□ -1.08
TOP2AP11388 RPL23AP59-201ENST00000399415 461 ntBASIC8.31□□□□□ -1.08
TOP2AP11388 RN7SKP263-201ENST00000411194 309 ntBASIC8.31□□□□□ -1.08
TOP2AP11388 AL158166.2-201ENST00000420845 748 ntTSL 2 BASIC8.31□□□□□ -1.08
TOP2AP11388 AL450472.1-201ENST00000439434 405 ntTSL 2 BASIC8.31□□□□□ -1.08
TOP2AP11388 AL157938.2-204ENST00000589667 826 ntTSL 5 BASIC8.31□□□□□ -1.08
TOP2AP11388 AL392048.1-201ENST00000613946 534 ntBASIC8.31□□□□□ -1.08
TOP2AP11388 MDM4-216ENST00000616250 9597 ntTSL 5 BASIC8.31□□□□□ -1.08
TOP2AP11388 GABRA3-201ENST00000370314 3712 ntAPPRIS P1 TSL 1 (best) BASIC8.31□□□□□ -1.08
TOP2AP11388 STXBP4-202ENST00000398391 2160 ntTSL 1 (best) BASIC8.31□□□□□ -1.08
TOP2AP11388 MROH9-202ENST00000367759 3165 ntAPPRIS ALT2 TSL 5 BASIC8.31□□□□□ -1.08
TOP2AP11388 MYO3B-202ENST00000408978 5529 ntAPPRIS P3 TSL 1 (best) BASIC8.3□□□□□ -1.08
TOP2AP11388 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC8.3□□□□□ -1.08
TOP2AP11388 AC135352.1-201ENST00000506173 1418 ntBASIC8.3□□□□□ -1.08
TOP2AP11388 AL137058.3-201ENST00000624531 3099 ntBASIC8.3□□□□□ -1.08
Retrieved 100 of 98,524 protein–RNA pairs in 89.6 ms