Protein–RNA interactions for Protein: P07988

SFTPB, Pulmonary surfactant-associated protein B, humanhuman

Predictions only

Length 381 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SFTPBP07988 AC113208.4-201ENST00000563568 206 ntTSL 3 BASIC4.67□□□□□ -1.66
SFTPBP07988 ULK4P1-201ENST00000564495 875 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 ULK4P2-204ENST00000569682 798 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.67□□□□□ -1.66
SFTPBP07988 AC022031.2-203ENST00000587346 565 ntTSL 4 BASIC4.67□□□□□ -1.66
SFTPBP07988 AC024563.1-201ENST00000601860 618 ntTSL 2 BASIC4.67□□□□□ -1.66
SFTPBP07988 AL355802.4-201ENST00000607635 548 ntBASIC4.67□□□□□ -1.66
SFTPBP07988 AC105265.3-202ENST00000610188 459 ntTSL 5 BASIC4.67□□□□□ -1.66
SFTPBP07988 MALAT1-205ENST00000610851 584 ntTSL 2 BASIC4.67□□□□□ -1.66
SFTPBP07988 WBP1LP8-201ENST00000617401 327 ntBASIC4.67□□□□□ -1.66
SFTPBP07988 HOTTIP_3.1-201ENST00000619957 337 ntBASIC4.67□□□□□ -1.66
SFTPBP07988 AC079906.1-201ENST00000621214 815 ntTSL 3 BASIC4.67□□□□□ -1.66
SFTPBP07988 CU639417.4-201ENST00000623928 207 ntBASIC4.67□□□□□ -1.66
SFTPBP07988 ADAMTS9-AS1-210ENST00000625328 699 ntTSL 5 BASIC4.67□□□□□ -1.66
SFTPBP07988 SUPT3H-202ENST00000371459 2091 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 NDUFS1-207ENST00000455934 3361 ntTSL 2 BASIC4.67□□□□□ -1.66
SFTPBP07988 LINC00624-202ENST00000621316 3372 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 FAM72B-201ENST00000355228 1773 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 POU2F1-212ENST00000541643 13937 ntAPPRIS ALT2 TSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 ANKRD36B-202ENST00000359901 4297 ntAPPRIS P1 TSL 5 BASIC4.67□□□□□ -1.66
SFTPBP07988 SCN1A-202ENST00000375405 8097 ntAPPRIS P3 TSL 5 BASIC4.67□□□□□ -1.66
SFTPBP07988 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 FGF1-215ENST00000619447 3818 ntAPPRIS P1 TSL 4 BASIC4.67□□□□□ -1.66
SFTPBP07988 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 AL450345.1-202ENST00000605741 3881 ntBASIC4.67□□□□□ -1.66
SFTPBP07988 TBCK-205ENST00000432496 3362 ntAPPRIS P1 TSL 2 BASIC4.67□□□□□ -1.66
SFTPBP07988 ANXA1-201ENST00000257497 1509 ntAPPRIS P1 TSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 LINC01192-202ENST00000470546 1519 ntTSL 1 (best) BASIC4.67□□□□□ -1.66
SFTPBP07988 RASSF6-204ENST00000395777 2735 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 TRIM51GP-201ENST00000534741 1350 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SFTPBP07988 GOLPH3L-201ENST00000271732 2999 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 POF1B-201ENST00000262753 3941 ntAPPRIS P3 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 SEC31A-217ENST00000505984 3596 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 EXO1-208ENST00000518483 2899 ntAPPRIS ALT2 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SFTPBP07988 EIF1B-201ENST00000232905 1010 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 OR9K1P-201ENST00000326513 941 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 FHIT-201ENST00000341848 174 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 SLC30A7-201ENST00000357650 1281 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 SPRR2G-201ENST00000368748 568 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 ADIG-201ENST00000373348 430 ntTSL 2 BASIC4.66□□□□□ -1.66
SFTPBP07988 OR6C65-201ENST00000379665 1076 ntAPPRIS P1 BASIC4.66□□□□□ -1.66
SFTPBP07988 AL391987.2-201ENST00000421848 492 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 AL021153.1-201ENST00000427360 308 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 AL353693.1-201ENST00000429567 442 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 ALG13-AS1-201ENST00000430794 195 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 RPS15AP29-201ENST00000445539 400 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 EIF4A1P6-201ENST00000448133 1210 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AL591363.1-201ENST00000450091 483 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 VDAC2P4-201ENST00000452925 711 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 RPS4XP12-201ENST00000461747 709 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 B4GALT4-AS1-201ENST00000470790 544 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 GIMAP2-202ENST00000474605 309 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 AC069304.1-201ENST00000491593 704 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AL049874.2-201ENST00000492636 288 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AC094108.1-201ENST00000502494 527 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 ERVH-1-201ENST00000507666 639 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 AC126768.1-201ENST00000511698 490 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 AC106732.1-201ENST00000512458 550 ntTSL 4 BASIC4.66□□□□□ -1.66
SFTPBP07988 snoU109.6-201ENST00000516831 118 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 IGKV2-18-201ENST00000522607 343 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 CASP1-206ENST00000526568 1061 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 CASP1-216ENST00000534497 825 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 AC009509.1-201ENST00000536317 1110 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 LINC02293-202ENST00000548385 358 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 AC079328.3-201ENST00000558905 691 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 AL731537.2-201ENST00000561565 951 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 SULT1C2P2-201ENST00000562517 294 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 RBM22P12-201ENST00000567098 1255 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 RN7SL290P-201ENST00000578661 300 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AP005403.1-201ENST00000579720 229 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 ABHD15-AS1-201ENST00000581474 187 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 AL157938.2-208ENST00000590461 877 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 SMIM24-204ENST00000591708 660 ntAPPRIS ALT2 TSL 2 BASIC4.66□□□□□ -1.66
SFTPBP07988 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 MTCO3P22-201ENST00000603219 784 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AC108738.1-201ENST00000603703 237 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AC005162.3-202ENST00000609495 483 ntTSL 5 BASIC4.66□□□□□ -1.66
SFTPBP07988 uc_338.7-201ENST00000621834 124 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 LINC00254-202ENST00000633813 439 ntTSL 3 BASIC4.66□□□□□ -1.66
SFTPBP07988 AC119674.1-212ENST00000641155 993 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 AC073869.8-201ENST00000641806 335 ntBASIC4.66□□□□□ -1.66
SFTPBP07988 TC2N-203ENST00000435962 5146 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SFTPBP07988 SCRG1-201ENST00000296506 4420 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 SASS6-201ENST00000287482 3880 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 RLIM-201ENST00000332687 8317 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 MYB-239ENST00000534121 2238 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 SAMSN1-203ENST00000400566 1888 ntAPPRIS P1 TSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 SRSF11-201ENST00000370949 3034 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 GAPT-202ENST00000396776 3016 ntAPPRIS P1 TSL 2 BASIC4.66□□□□□ -1.66
SFTPBP07988 FOXP2-205ENST00000393489 2285 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
SFTPBP07988 CREM-202ENST00000342105 1541 ntTSL 1 (best) BASIC4.66□□□□□ -1.66
Retrieved 100 of 98,524 protein–RNA pairs in 131.8 ms