Protein–RNA interactions for Protein: P07384

CAPN1, Calpain-1 catalytic subunit, humanhuman

Predictions only

Length 714 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN1P07384 DYNAP-201ENST00000321600 2027 ntAPPRIS P3 TSL 2 BASIC5.11□□□□□ -1.59
CAPN1P07384 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 XIRP2-207ENST00000628543 12182 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 RNA5SP507-201ENST00000363603 121 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 SNORA67-201ENST00000384423 137 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 VDAC2P1-201ENST00000399358 958 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 CTSL3P-202ENST00000412179 788 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 MORF4L2-205ENST00000423833 717 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 AL356056.1-206ENST00000424615 407 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 FAM96AP1-201ENST00000430879 482 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 ARPP21-215ENST00000432682 1015 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC005518.1-201ENST00000448131 1116 ntTSL 2 BASIC5.11□□□□□ -1.59
CAPN1P07384 AL591623.2-201ENST00000449978 222 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 OTX2P1-201ENST00000450956 354 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AC104634.1-201ENST00000452720 462 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 MTND6P32-201ENST00000457611 483 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AC073486.1-202ENST00000458437 489 ntTSL 3 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC245028.2-201ENST00000458673 253 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AC108161.1-201ENST00000461060 402 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AC015864.1-201ENST00000496512 544 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 THUMPD3-AS1-215ENST00000521609 793 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC078906.1-201ENST00000523602 798 ntTSL 3 BASIC5.11□□□□□ -1.59
CAPN1P07384 UQCRB-209ENST00000523920 695 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 LINC02402-201ENST00000550337 1212 ntTSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 AC127381.1-201ENST00000555979 939 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AC066613.1-201ENST00000559977 1053 ntTSL 2 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC010531.5-201ENST00000602779 450 ntTSL 3 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC069307.1-201ENST00000602820 447 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AC008536.1-201ENST00000602872 669 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC009597.2-201ENST00000604659 592 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 DARS-AS1-220ENST00000607985 660 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC004948.1-201ENST00000609858 672 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 DEC1-204ENST00000614246 210 ntAPPRIS ALT2 TSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 AF117829.2-201ENST00000619538 361 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 AP002505.2-201ENST00000623585 696 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC072062.1-209ENST00000627336 772 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC134980.1-203ENST00000640541 570 ntTSL 4 BASIC5.11□□□□□ -1.59
CAPN1P07384 ZNF571-201ENST00000328550 4113 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 HERC1-201ENST00000443617 15137 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 OR4K1-203ENST00000641429 1358 ntAPPRIS P1 BASIC5.11□□□□□ -1.59
CAPN1P07384 AC073136.1-201ENST00000449426 2884 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 SYNE2-203ENST00000357395 21555 ntTSL 5 BASIC5.11□□□□□ -1.59
CAPN1P07384 CD80-204ENST00000478182 1491 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 ATPAF1-212ENST00000542495 1779 ntTSL 2 BASIC5.11□□□□□ -1.59
CAPN1P07384 GBA3-205ENST00000511446 2018 ntTSL 2 BASIC5.11□□□□□ -1.59
CAPN1P07384 DYTN-201ENST00000452335 2051 ntAPPRIS P1 TSL 1 (best) BASIC5.11□□□□□ -1.59
CAPN1P07384 AC083843.3-201ENST00000623679 2186 ntBASIC5.11□□□□□ -1.59
CAPN1P07384 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 ATP7A-202ENST00000343533 8289 ntTSL 5 BASIC5.1□□□□□ -1.59
CAPN1P07384 ATP1B4-202ENST00000361319 3856 ntAPPRIS P3 TSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 RNU1-43P-201ENST00000365052 165 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AL353740.1-201ENST00000366253 575 ntTSL 2 BASIC5.1□□□□□ -1.59
CAPN1P07384 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 DEC1-201ENST00000374016 1251 ntAPPRIS P2 TSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 AC233289.1-201ENST00000403700 508 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 DUTP5-201ENST00000406790 469 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 PCNPP4-201ENST00000414817 517 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC5.1□□□□□ -1.59
CAPN1P07384 LINC01821-201ENST00000419786 1084 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 SOS1-IT1-201ENST00000420644 539 ntTSL 5 BASIC5.1□□□□□ -1.59
CAPN1P07384 AL139240.1-201ENST00000422963 505 ntTSL 2 BASIC5.1□□□□□ -1.59
CAPN1P07384 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.1□□□□□ -1.59
CAPN1P07384 VAV3-AS1-201ENST00000438318 619 ntTSL 2 BASIC5.1□□□□□ -1.59
CAPN1P07384 AF064858.2-201ENST00000440714 292 ntTSL 3 BASIC5.1□□□□□ -1.59
CAPN1P07384 AC002553.2-201ENST00000453217 340 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AL389915.2-201ENST00000454576 441 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AP000942.1-201ENST00000463969 747 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 CREM-228ENST00000473940 1182 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 RPSAP50-201ENST00000481955 852 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC5.1□□□□□ -1.59
CAPN1P07384 NIFKP7-201ENST00000503365 834 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AC024132.2-201ENST00000506878 482 ntTSL 3 BASIC5.1□□□□□ -1.59
CAPN1P07384 RNA5SP373-201ENST00000517271 95 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC5.1□□□□□ -1.59
CAPN1P07384 AP003696.1-201ENST00000519337 770 ntTSL 3 BASIC5.1□□□□□ -1.59
CAPN1P07384 EIF4A2P5-201ENST00000529914 499 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AC022832.1-201ENST00000530718 645 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 USP28-213ENST00000544967 3498 ntTSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 C8orf59-206ENST00000545322 491 ntTSL 3 BASIC5.1□□□□□ -1.59
CAPN1P07384 MIR3691-201ENST00000578066 90 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 RN7SL708P-201ENST00000580952 299 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AC011824.3-201ENST00000585093 563 ntTSL 4 BASIC5.1□□□□□ -1.59
CAPN1P07384 ZNF285-204ENST00000591679 2388 ntAPPRIS ALT2 TSL 4 BASIC5.1□□□□□ -1.59
CAPN1P07384 AC097376.2-202ENST00000608345 433 ntTSL 3 BASIC5.1□□□□□ -1.59
CAPN1P07384 AL121612.2-201ENST00000612261 482 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AL353770.4-201ENST00000614936 468 ntTSL 5 BASIC5.1□□□□□ -1.59
CAPN1P07384 AL590491.2-203ENST00000614969 468 ntTSL 4 BASIC5.1□□□□□ -1.59
CAPN1P07384 AC090527.3-201ENST00000619041 548 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 AC087821.1-201ENST00000623639 567 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 MYOCOS-202ENST00000636788 1039 ntAPPRIS ALT2 TSL 5 BASIC5.1□□□□□ -1.59
CAPN1P07384 CASC19-222ENST00000641321 1173 ntBASIC5.1□□□□□ -1.59
CAPN1P07384 LINC01902-203ENST00000637369 7356 ntTSL 5 BASIC5.1□□□□□ -1.59
CAPN1P07384 INTU-201ENST00000335251 13233 ntAPPRIS P1 TSL 1 (best) BASIC5.1□□□□□ -1.59
CAPN1P07384 OR9Q2-202ENST00000641291 3774 ntAPPRIS P1 BASIC5.1□□□□□ -1.59
CAPN1P07384 ZNF780B-202ENST00000434248 8665 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
CAPN1P07384 ZNF780B-207ENST00000617676 8664 ntAPPRIS P1 TSL 5 BASIC5.1□□□□□ -1.59
Retrieved 100 of 98,524 protein–RNA pairs in 76.4 ms