Protein–RNA interactions for Protein: P06340

HLA-DOA, HLA class II histocompatibility antigen, DO alpha chain, humanhuman

Predictions only

Length 250 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DOAP06340 AL133247.2-201ENST00000603236 482 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC015712.7-201ENST00000615211 635 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 AP002791.1-201ENST00000623291 381 ntBASIC6.3□□□□□ -1.4
HLA-DOAP06340 PCDHB2-203ENST00000624874 565 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 ZNF24-202ENST00000399061 6282 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 WDR17-201ENST00000280190 4705 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AC245100.4-204ENST00000635587 1555 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 AQP9-201ENST00000219919 3034 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 ESRRG-219ENST00000487276 3015 ntAPPRIS P1 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 LGALS8-220ENST00000526634 1852 ntAPPRIS ALT2 TSL 5 BASIC6.3□□□□□ -1.4
HLA-DOAP06340 VPS13C-204ENST00000395898 11012 ntAPPRIS ALT2 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 ART3-202ENST00000349321 1528 ntAPPRIS P3 TSL 1 (best) BASIC6.3□□□□□ -1.4
HLA-DOAP06340 PEAK1-201ENST00000312493 11512 ntAPPRIS P1 TSL 5 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 THEMIS-206ENST00000630369 2786 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 LMO3-201ENST00000261169 3810 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC114774.1-201ENST00000507410 1770 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 LINC02097-201ENST00000419257 2063 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 PRUNE2-201ENST00000223609 2697 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 SV2B-201ENST00000330276 11202 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 LIMA1-215ENST00000552823 3254 ntAPPRIS ALT2 TSL 2 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 TRPC4-201ENST00000338947 2912 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 OR6C74-201ENST00000343870 1105 ntAPPRIS P1 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 KMO-203ENST00000366558 1868 ntAPPRIS ALT2 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 SPATA42-201ENST00000369989 535 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 DNASE2B-202ENST00000370665 1269 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AL133270.1-201ENST00000402635 279 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 RNU6ATAC7P-201ENST00000408111 127 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 GNG12-AS1-202ENST00000414904 796 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 MTND4LP21-201ENST00000415303 295 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 NPM1P26-201ENST00000426339 738 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 LINC00458-202ENST00000427299 1030 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC006055.1-201ENST00000432423 411 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AF127577.2-201ENST00000436429 824 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 H3F3BP1-201ENST00000440551 403 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC007000.2-201ENST00000442564 487 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 SUMO2P1-206ENST00000445436 284 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 EIF4EBP2P1-201ENST00000450009 343 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC011287.2-201ENST00000456809 842 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AL359915.2-203ENST00000457043 540 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC002075.1-201ENST00000457396 676 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC079168.1-201ENST00000458741 345 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 BX284632.1-201ENST00000478218 541 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC108157.1-201ENST00000510511 539 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC091912.1-201ENST00000511351 248 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 MSC-AS1-205ENST00000519068 569 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC090103.1-201ENST00000520386 485 ntTSL 2 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC117834.1-202ENST00000521203 561 ntTSL 4 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC013701.1-201ENST00000522657 465 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 SPIC-201ENST00000551346 1132 ntAPPRIS P1 TSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AL109741.3-201ENST00000561748 592 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 LINC00254-201ENST00000563416 662 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC135178.3-202ENST00000580537 579 ntTSL 3 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC011447.4-201ENST00000587562 111 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC009237.13-201ENST00000603193 276 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC009597.2-201ENST00000604659 592 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC024940.4-201ENST00000605507 246 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC112503.1-201ENST00000608436 391 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AL139124.1-201ENST00000609123 421 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC092747.4-201ENST00000620519 1861 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC023490.1-202ENST00000620909 820 ntTSL 5 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 CCL4-203ENST00000621626 552 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 AC026422.1-201ENST00000623961 452 ntBASIC6.29□□□□□ -1.4
HLA-DOAP06340 USP7-202ENST00000381886 3587 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 NCOA1-206ENST00000407230 4745 ntTSL 1 (best) BASIC6.29□□□□□ -1.4
HLA-DOAP06340 CASP10-204ENST00000346817 3926 ntAPPRIS ALT2 TSL 5 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 SCN2A-203ENST00000375437 8792 ntAPPRIS ALT1 TSL 5 BASIC6.29□□□□□ -1.4
HLA-DOAP06340 PHC3-214ENST00000494943 5030 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC087473.1-201ENST00000561320 2471 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 CPSF2-201ENST00000298875 13035 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 MAPRE2-202ENST00000413393 4173 ntAPPRIS ALT1 TSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 GPALPP1-201ENST00000357537 5368 ntTSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 TYW3-203ENST00000457880 3335 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 RPE65-201ENST00000262340 2610 ntAPPRIS P1 TSL 1 (best) BASIC6.28□□□□□ -1.4
HLA-DOAP06340 OR7G2-201ENST00000305456 1038 ntAPPRIS P2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 SNORD115-48-201ENST00000364764 76 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 PRKACB-203ENST00000370684 869 ntTSL 5 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 MIR600-201ENST00000385007 98 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 LINC01442-201ENST00000414201 704 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 SMIM2-IT1-201ENST00000415082 478 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 MOBP-203ENST00000415443 577 ntAPPRIS ALT2 TSL 4 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL359378.2-201ENST00000415575 746 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 MTCO2P21-201ENST00000419780 677 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 TCEA1P2-201ENST00000420496 906 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL031428.1-201ENST00000427154 666 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 VN1R54P-201ENST00000435210 1049 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 MTND2P21-201ENST00000436242 1042 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC245427.2-201ENST00000438839 263 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL512271.1-201ENST00000439878 434 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AL513321.1-201ENST00000441175 761 ntBASIC6.28□□□□□ -1.4
HLA-DOAP06340 AC007179.2-204ENST00000444001 765 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 LINC01307-202ENST00000444327 771 ntTSL 2 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 AF127577.1-201ENST00000446301 562 ntTSL 3 BASIC6.28□□□□□ -1.4
HLA-DOAP06340 Z83846.1-201ENST00000446798 265 ntBASIC6.28□□□□□ -1.4
Retrieved 100 of 98,524 protein–RNA pairs in 122.1 ms