Protein–RNA interactions for Protein: P03886

MT-ND1, NADH-ubiquinone oxidoreductase chain 1, humanhuman

Predictions only

Length 318 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND1P03886 MTCYBP7-201ENST00000419540 1134 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC013470.3-201ENST00000420252 1194 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AL158817.1-201ENST00000422310 933 ntTSL 3 BASIC4.8□□□□□ -1.64
MT-ND1P03886 LINC01740-201ENST00000423842 332 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 TXNIP-201ENST00000425134 1225 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 LINC01400-201ENST00000426358 947 ntTSL 3 BASIC4.8□□□□□ -1.64
MT-ND1P03886 KCTD9P1-201ENST00000430462 1167 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 RPS26P4-201ENST00000431743 355 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 RSL24D1P8-201ENST00000434442 492 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AP000936.3-201ENST00000438127 255 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AL390119.1-201ENST00000440329 312 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC073109.1-201ENST00000445066 978 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 HMGN1P36-201ENST00000446623 298 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC060834.2-201ENST00000447999 618 ntTSL 3 BASIC4.8□□□□□ -1.64
MT-ND1P03886 SRGAP3-AS4-201ENST00000449023 377 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 BUD31P2-201ENST00000449374 300 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC022431.1-201ENST00000450941 438 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AL592431.1-201ENST00000451090 317 ntTSL 3 BASIC4.8□□□□□ -1.64
MT-ND1P03886 MTND3P4-201ENST00000453537 303 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC034195.1-203ENST00000455703 728 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AC068631.1-205ENST00000455926 409 ntTSL 3 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AC091180.1-201ENST00000462104 372 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC020779.1-201ENST00000478757 796 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC037198.2-201ENST00000478845 733 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 LARP7P4-201ENST00000481075 878 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 RPL7P40-201ENST00000481703 745 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 LINC01192-206ENST00000489012 818 ntTSL 5 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AC016746.1-201ENST00000489557 831 ntTSL 2 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AZIN1-AS1-203ENST00000517996 756 ntTSL 3 BASIC4.8□□□□□ -1.64
MT-ND1P03886 OR8X1P-201ENST00000534542 869 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC005868.1-201ENST00000536421 331 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 RNASE9-204ENST00000553541 1136 ntAPPRIS P3 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 AC013652.1-202ENST00000561058 570 ntTSL 4 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AGGF1P9-201ENST00000561884 913 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 SULT1C2P2-201ENST00000562517 294 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 TM6SF1-207ENST00000565774 1020 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 AL356580.1-201ENST00000604129 159 ntTSL 5 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AC010245.2-201ENST00000606908 1167 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AL137078.2-201ENST00000615740 318 ntTSL 5 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AL356274.1-201ENST00000617064 410 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 AC021106.3-201ENST00000623925 531 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 USP44-201ENST00000258499 4022 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 KLF12-201ENST00000377669 10637 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 EIF3H-209ENST00000521861 3959 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 DNTTIP2-202ENST00000436063 5897 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 CENPE-208ENST00000611174 8260 ntTSL 5 BASIC4.8□□□□□ -1.64
MT-ND1P03886 AC007996.1-201ENST00000620414 2821 ntBASIC4.8□□□□□ -1.64
MT-ND1P03886 FBXL13-207ENST00000455112 2274 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 CKAP5-202ENST00000354558 6428 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 NLRP11-202ENST00000589824 3231 ntAPPRIS ALT2 TSL 5 BASIC4.8□□□□□ -1.64
MT-ND1P03886 FZD6-205ENST00000522566 3719 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
MT-ND1P03886 SMG1P3-204ENST00000520823 3194 ntTSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 NUP107-202ENST00000378905 2859 ntTSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 BCL2L14-213ENST00000589718 1850 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 SMC2-AS1-201ENST00000603487 7020 ntTSL 2 BASIC4.79□□□□□ -1.64
MT-ND1P03886 LINC01189-201ENST00000428440 3321 ntTSL 2 BASIC4.79□□□□□ -1.64
MT-ND1P03886 MUC12-202ENST00000379442 16737 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 ESRRG-202ENST00000360012 5431 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MT-ND1P03886 ERI2-202ENST00000357967 3499 ntAPPRIS P1 TSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 RNF20-202ENST00000389120 3940 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
MT-ND1P03886 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC4.79□□□□□ -1.64
MT-ND1P03886 CCL20-201ENST00000358813 800 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
MT-ND1P03886 RNA5SP234-201ENST00000363916 119 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 FIG4-202ENST00000368941 791 ntTSL 3 BASIC4.79□□□□□ -1.64
MT-ND1P03886 RNU1-74P-201ENST00000384108 171 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 TRAV16-201ENST00000390444 329 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
MT-ND1P03886 AL034403.1-201ENST00000399414 885 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AC005529.1-201ENST00000411969 289 ntTSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 AL355300.1-201ENST00000412439 187 ntTSL 3 BASIC4.79□□□□□ -1.64
MT-ND1P03886 AL390115.1-201ENST00000425271 423 ntTSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 NAP1L4P2-201ENST00000425958 899 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AL139148.1-201ENST00000427122 680 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 RPL23AP4-201ENST00000427757 463 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 MAJIN-202ENST00000432175 838 ntAPPRIS P3 TSL 1 (best) BASIC4.79□□□□□ -1.64
MT-ND1P03886 AL161722.2-201ENST00000434731 981 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AL591178.1-201ENST00000439239 454 ntTSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 TBX18-AS1-202ENST00000441863 382 ntTSL 2 BASIC4.79□□□□□ -1.64
MT-ND1P03886 RPS11P7-201ENST00000442125 465 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AF130359.1-201ENST00000444868 438 ntTSL 3 BASIC4.79□□□□□ -1.64
MT-ND1P03886 AL591363.1-201ENST00000450091 483 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 MTND2P3-201ENST00000452458 470 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC4.79□□□□□ -1.64
MT-ND1P03886 HAUS1P1-201ENST00000505275 832 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AC097173.1-201ENST00000505862 819 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 ACTR6P1-201ENST00000514311 1104 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AC027308.1-201ENST00000517993 110 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AB015752.1-201ENST00000521975 578 ntTSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 HMGB1P40-201ENST00000525121 540 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AP002812.2-201ENST00000525594 585 ntTSL 4 BASIC4.79□□□□□ -1.64
MT-ND1P03886 MOCS2-208ENST00000527216 707 ntTSL 3 BASIC4.79□□□□□ -1.64
MT-ND1P03886 AP000873.2-205ENST00000529031 435 ntTSL 2 BASIC4.79□□□□□ -1.64
MT-ND1P03886 NOX4-213ENST00000531342 696 ntTSL 1 (best) BASIC4.79□□□□□ -1.64
MT-ND1P03886 AC004551.1-201ENST00000552784 575 ntTSL 4 BASIC4.79□□□□□ -1.64
MT-ND1P03886 AC007601.2-201ENST00000566957 502 ntTSL 3 BASIC4.79□□□□□ -1.64
MT-ND1P03886 NDUFA5P11-201ENST00000567995 343 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 AC023932.1-201ENST00000582726 429 ntTSL 3 BASIC4.79□□□□□ -1.64
MT-ND1P03886 Z98949.1-203ENST00000597284 851 ntTSL 5 BASIC4.79□□□□□ -1.64
MT-ND1P03886 AC124856.1-201ENST00000600819 896 ntBASIC4.79□□□□□ -1.64
MT-ND1P03886 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC4.79□□□□□ -1.64
Retrieved 100 of 98,524 protein–RNA pairs in 77.2 ms