Protein–RNA interactions for Protein: P02649

APOE, Apolipoprotein E, humanhuman

Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
APOEP02649 GABRG2-214ENST00000639111 11735 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOEP02649 PTK2-212ENST00000519419 4439 ntTSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC5.28□□□□□ -1.56
APOEP02649 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOEP02649 RNA5SP455-201ENST00000365190 119 ntBASIC5.28□□□□□ -1.56
APOEP02649 AL645927.1-201ENST00000396783 406 ntBASIC5.28□□□□□ -1.56
APOEP02649 CHMP1B2P-201ENST00000399581 597 ntBASIC5.28□□□□□ -1.56
APOEP02649 RN7SKP247-201ENST00000411094 308 ntBASIC5.28□□□□□ -1.56
APOEP02649 AC007738.1-201ENST00000413892 348 ntBASIC5.28□□□□□ -1.56
APOEP02649 AC104333.2-201ENST00000422630 192 ntBASIC5.28□□□□□ -1.56
APOEP02649 BRWD1P3-201ENST00000428816 390 ntBASIC5.28□□□□□ -1.56
APOEP02649 AL353689.2-201ENST00000433837 440 ntTSL 3 BASIC5.28□□□□□ -1.56
APOEP02649 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
APOEP02649 AC004980.3-201ENST00000447046 365 ntBASIC5.28□□□□□ -1.56
APOEP02649 ZIC4-AS1-201ENST00000462168 268 ntTSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 AC004453.1-201ENST00000487895 408 ntBASIC5.28□□□□□ -1.56
APOEP02649 CREM-238ENST00000488741 651 ntTSL 2 BASIC5.28□□□□□ -1.56
APOEP02649 RN7SL244P-201ENST00000493405 297 ntBASIC5.28□□□□□ -1.56
APOEP02649 RN7SL808P-201ENST00000496066 299 ntBASIC5.28□□□□□ -1.56
APOEP02649 COX6B1P5-201ENST00000509843 249 ntBASIC5.28□□□□□ -1.56
APOEP02649 OR7E128P-201ENST00000532736 1024 ntBASIC5.28□□□□□ -1.56
APOEP02649 SDHAF2-208ENST00000543265 438 ntTSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 NMNAT1P1-201ENST00000554095 876 ntBASIC5.28□□□□□ -1.56
APOEP02649 AC009554.1-201ENST00000559251 399 ntTSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 AC022196.1-202ENST00000559570 462 ntTSL 3 BASIC5.28□□□□□ -1.56
APOEP02649 AC006504.5-202ENST00000586784 656 ntTSL 2 BASIC5.28□□□□□ -1.56
APOEP02649 MIR7515HG-254ENST00000593269 943 ntTSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 AL024498.1-201ENST00000606522 1100 ntTSL 3 BASIC5.28□□□□□ -1.56
APOEP02649 AL445222.1-201ENST00000607259 628 ntBASIC5.28□□□□□ -1.56
APOEP02649 AL021707.7-201ENST00000607991 416 ntBASIC5.28□□□□□ -1.56
APOEP02649 AP005432.2-201ENST00000608162 586 ntBASIC5.28□□□□□ -1.56
APOEP02649 CASC19-222ENST00000641321 1173 ntBASIC5.28□□□□□ -1.56
APOEP02649 AC073869.10-201ENST00000642016 354 ntBASIC5.28□□□□□ -1.56
APOEP02649 AC100778.3-201ENST00000580060 1750 ntBASIC5.28□□□□□ -1.56
APOEP02649 HHLA2-210ENST00000491820 1439 ntAPPRIS ALT2 TSL 1 (best) BASIC5.28□□□□□ -1.56
APOEP02649 XKRY2-202ENST00000623874 1581 ntBASIC5.28□□□□□ -1.56
APOEP02649 XKRY-202ENST00000624960 1581 ntBASIC5.28□□□□□ -1.56
APOEP02649 LRRC53-201ENST00000294635 3859 ntAPPRIS P1 TSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 PDE10A-201ENST00000366882 8233 ntAPPRIS P3 TSL 5 BASIC5.28□□□□□ -1.56
APOEP02649 OR2AP1-202ENST00000641114 1548 ntAPPRIS P1 BASIC5.28□□□□□ -1.56
APOEP02649 LCMT1-AS2-202ENST00000565214 5666 ntBASIC5.28□□□□□ -1.56
APOEP02649 GPATCH2L-214ENST00000621494 12396 ntAPPRIS P1 TSL 2 BASIC5.28□□□□□ -1.56
APOEP02649 STAU2-220ENST00000522695 2646 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 MED23-203ENST00000368058 4576 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 ANXA1-202ENST00000376911 2209 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 ZFX-203ENST00000379177 7558 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 EAF2-201ENST00000273668 992 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 AC017079.1-201ENST00000333650 415 ntBASIC5.27□□□□□ -1.57
APOEP02649 IKZF3-202ENST00000346243 1296 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 SMARCA2-206ENST00000382185 1584 ntTSL 2 BASIC5.27□□□□□ -1.57
APOEP02649 Z97832.1-201ENST00000402490 328 ntBASIC5.27□□□□□ -1.57
APOEP02649 IFNA17-201ENST00000413767 980 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
APOEP02649 COX6CP13-201ENST00000428703 226 ntBASIC5.27□□□□□ -1.57
APOEP02649 KCNIP1-205ENST00000434108 726 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 IKZF3-212ENST00000439016 1246 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 GK-IT1-201ENST00000441146 397 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC5.27□□□□□ -1.57
APOEP02649 AL589765.3-201ENST00000446084 462 ntBASIC5.27□□□□□ -1.57
APOEP02649 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 AL035409.1-201ENST00000454305 497 ntTSL 2 BASIC5.27□□□□□ -1.57
APOEP02649 AC026316.2-201ENST00000473110 263 ntTSL 3 BASIC5.27□□□□□ -1.57
APOEP02649 AC010350.1-201ENST00000504908 231 ntBASIC5.27□□□□□ -1.57
APOEP02649 AC025263.2-201ENST00000550437 548 ntAPPRIS P1 TSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 LINC02307-201ENST00000553827 257 ntTSL 3 BASIC5.27□□□□□ -1.57
APOEP02649 AC009562.1-202ENST00000558755 565 ntTSL 4 BASIC5.27□□□□□ -1.57
APOEP02649 BCAR4-204ENST00000573319 1273 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 UBA52-209ENST00000597451 514 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 AC018695.5-201ENST00000605872 315 ntBASIC5.27□□□□□ -1.57
APOEP02649 LINC02112-204ENST00000606222 429 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 USP32P2-207ENST00000608376 253 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 UGP2-229ENST00000613823 1858 ntAPPRIS ALT1 TSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 AC108359.1-201ENST00000616451 1211 ntBASIC5.27□□□□□ -1.57
APOEP02649 RBPJP2-201ENST00000618187 1444 ntBASIC5.27□□□□□ -1.57
APOEP02649 AP000648.2-201ENST00000624182 404 ntBASIC5.27□□□□□ -1.57
APOEP02649 CDC23-202ENST00000394886 3155 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 PRG4-203ENST00000367485 4765 ntAPPRIS ALT2 TSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 AP001642.1-201ENST00000624727 2117 ntBASIC5.27□□□□□ -1.57
APOEP02649 AC025574.1-201ENST00000554784 1653 ntBASIC5.27□□□□□ -1.57
APOEP02649 AP000542.2-201ENST00000623199 6179 ntBASIC5.27□□□□□ -1.57
APOEP02649 AL162425.1-201ENST00000423637 1525 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
APOEP02649 GAS2L3-203ENST00000539410 2229 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
APOEP02649 AC024337.2-201ENST00000616608 2797 ntTSL 5 BASIC5.27□□□□□ -1.57
APOEP02649 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
APOEP02649 ART3-203ENST00000355810 1561 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
APOEP02649 DNAAF4-CCPG1-201ENST00000565113 4589 ntTSL 2 BASIC5.26□□□□□ -1.57
APOEP02649 OR5B12-202ENST00000641921 1807 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
APOEP02649 ERC2-201ENST00000288221 6138 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
APOEP02649 CFAP126-201ENST00000367974 774 ntAPPRIS P1 TSL 2 BASIC5.26□□□□□ -1.57
APOEP02649 AC012512.1-201ENST00000446594 718 ntBASIC5.26□□□□□ -1.57
APOEP02649 EIF4EBP2P1-201ENST00000450009 343 ntBASIC5.26□□□□□ -1.57
APOEP02649 RN7SL329P-201ENST00000467740 299 ntBASIC5.26□□□□□ -1.57
APOEP02649 AC119150.1-201ENST00000507143 563 ntTSL 2 BASIC5.26□□□□□ -1.57
APOEP02649 AC020551.1-201ENST00000512036 539 ntTSL 3 BASIC5.26□□□□□ -1.57
APOEP02649 AC069272.1-201ENST00000514843 680 ntTSL 3 BASIC5.26□□□□□ -1.57
APOEP02649 AC062004.1-201ENST00000518706 686 ntTSL 3 BASIC5.26□□□□□ -1.57
APOEP02649 AC022784.7-201ENST00000520017 651 ntTSL 3 BASIC5.26□□□□□ -1.57
APOEP02649 AC131254.2-201ENST00000521908 550 ntTSL 3 BASIC5.26□□□□□ -1.57
APOEP02649 AC105254.2-201ENST00000603636 436 ntBASIC5.26□□□□□ -1.57
APOEP02649 BX005214.3-202ENST00000619809 325 ntBASIC5.26□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 81.1 ms