Protein–RNA interactions for Protein: P02461

COL3A1, Collagen alpha-1(III) chain, humanhuman

Predicted RBP Predictions only

Length 1,466 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL3A1P02461 RPL12P43-201ENST00000420608 499 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 AC000124.1-201ENST00000448311 957 ntTSL 2 BASIC6.48□□□□□ -1.37
COL3A1P02461 AL356390.1-201ENST00000455684 397 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 AC117513.1-201ENST00000462792 766 ntTSL 2 BASIC6.48□□□□□ -1.37
COL3A1P02461 RNA5SP230-201ENST00000517039 122 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 AC005868.1-201ENST00000536421 331 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 MYL12A-202ENST00000536605 899 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL3A1P02461 AC027544.2-201ENST00000539313 630 ntTSL 5 BASIC6.48□□□□□ -1.37
COL3A1P02461 AC244502.1-203ENST00000541008 576 ntTSL 4 BASIC6.48□□□□□ -1.37
COL3A1P02461 AL049830.4-201ENST00000555149 351 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 AC090970.1-201ENST00000561207 381 ntTSL 5 BASIC6.48□□□□□ -1.37
COL3A1P02461 LINC02137-203ENST00000567448 930 ntTSL 5 BASIC6.48□□□□□ -1.37
COL3A1P02461 AC090286.3-201ENST00000573133 187 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 MYL12A-209ENST00000580887 899 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL3A1P02461 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC6.48□□□□□ -1.37
COL3A1P02461 AC253576.2-201ENST00000618815 580 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 AC022306.3-201ENST00000619930 550 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 LINC01587-204ENST00000623565 873 ntTSL 2 BASIC6.48□□□□□ -1.37
COL3A1P02461 LINC02342-201ENST00000627910 461 ntTSL 5 BASIC6.48□□□□□ -1.37
COL3A1P02461 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL3A1P02461 CLCA1-202ENST00000394711 3118 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL3A1P02461 CHD2-208ENST00000626874 7764 ntTSL 1 (best) BASIC6.48□□□□□ -1.37
COL3A1P02461 ACE2-202ENST00000427411 3507 ntAPPRIS P1 TSL 1 (best) BASIC6.48□□□□□ -1.37
COL3A1P02461 DHX9P1-201ENST00000436565 3076 ntBASIC6.48□□□□□ -1.37
COL3A1P02461 OR4N5-201ENST00000333629 927 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL3A1P02461 RNA5SP505-201ENST00000364748 108 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 TRBV24-1-201ENST00000390397 381 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL3A1P02461 AL035419.1-201ENST00000397037 564 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 FAR2P2-201ENST00000413041 594 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AL139128.1-201ENST00000413921 941 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 SLC9B1P4-201ENST00000421957 1288 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 FAR2P4-202ENST00000425399 584 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AL359265.2-201ENST00000434367 631 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC105271.1-201ENST00000442876 497 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AP001434.1-201ENST00000444977 287 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC034228.3-201ENST00000446275 562 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC073264.2-201ENST00000448886 166 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AP001596.1-202ENST00000452460 644 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 KIAA0895-209ENST00000453212 956 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 CYP4F62P-203ENST00000455215 552 ntTSL 4 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC093801.2-201ENST00000503966 1050 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC139491.3-201ENST00000509643 684 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC073429.1-201ENST00000511749 503 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 CASC19-203ENST00000523510 575 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC104574.1-201ENST00000561182 925 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL3A1P02461 C1QBP-206ENST00000574444 901 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC015912.1-201ENST00000574826 538 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC018371.1-201ENST00000584560 640 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC114684.1-201ENST00000587659 352 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AL133406.3-201ENST00000606817 541 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC104820.1-201ENST00000624183 307 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 MFSD4BP1-201ENST00000513330 1552 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 NALCN-201ENST00000251127 6818 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL3A1P02461 NRIP1-201ENST00000318948 7556 ntAPPRIS P1 TSL 2 BASIC6.47□□□□□ -1.37
COL3A1P02461 MTCO1P15-201ENST00000529569 1526 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 INTS6-220ENST00000497989 3022 ntTSL 2 BASIC6.47□□□□□ -1.37
COL3A1P02461 OR5AN1-201ENST00000313940 1037 ntAPPRIS P1 BASIC6.47□□□□□ -1.37
COL3A1P02461 NRG4-201ENST00000394907 1159 ntAPPRIS P1 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL3A1P02461 NOSTRIN-202ENST00000397206 1446 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL3A1P02461 RPL7P58-201ENST00000402913 758 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AHSA2-203ENST00000410073 479 ntTSL 5 BASIC6.47□□□□□ -1.37
COL3A1P02461 RPL7P57-201ENST00000423238 740 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AL356361.2-201ENST00000430542 443 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 ZDHHC20P1-204ENST00000435787 423 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 TFDP2-211ENST00000479040 1201 ntAPPRIS ALT2 TSL 1 (best) BASIC6.47□□□□□ -1.37
COL3A1P02461 AC008897.1-201ENST00000494006 347 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC010460.2-201ENST00000509054 677 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC110760.3-202ENST00000515177 371 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC090541.1-201ENST00000519803 467 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC006349.1-201ENST00000555526 235 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC007906.1-201ENST00000568648 510 ntTSL 5 BASIC6.47□□□□□ -1.37
COL3A1P02461 AL121989.1-201ENST00000585888 746 ntTSL 3 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC007497.1-201ENST00000610421 561 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 ZNF701-207ENST00000611267 1136 ntTSL 2 BASIC6.47□□□□□ -1.37
COL3A1P02461 AL591926.2-202ENST00000615199 719 ntTSL 5 BASIC6.47□□□□□ -1.37
COL3A1P02461 AC022960.3-201ENST00000619794 441 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC105105.5-201ENST00000622635 1294 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AC011755.1-201ENST00000623763 2049 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 AJ239318.1-201ENST00000624445 607 ntTSL 1 (best) BASIC6.47□□□□□ -1.37
COL3A1P02461 AC106858.1-201ENST00000637497 429 ntBASIC6.47□□□□□ -1.37
COL3A1P02461 FAM49B-230ENST00000639004 837 ntTSL 5 BASIC6.47□□□□□ -1.37
COL3A1P02461 CYP4Z1-201ENST00000334194 1906 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL3A1P02461 VIT-206ENST00000457137 1344 ntTSL 1 (best) BASIC6.46□□□□□ -1.37
COL3A1P02461 SPINK5-202ENST00000359874 3656 ntAPPRIS ALT2 TSL 1 (best) BASIC6.46□□□□□ -1.37
COL3A1P02461 TEK-205ENST00000615002 4666 ntTSL 5 BASIC6.46□□□□□ -1.38
COL3A1P02461 DAZ4-207ENST00000634662 1832 ntAPPRIS ALT2 TSL 5 BASIC6.46□□□□□ -1.38
COL3A1P02461 PCAT19-201ENST00000588495 3472 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL3A1P02461 TMEM68-202ENST00000434581 2549 ntAPPRIS P1 TSL 5 BASIC6.46□□□□□ -1.38
COL3A1P02461 NOSTRIN-206ENST00000444448 2537 ntTSL 5 BASIC6.46□□□□□ -1.38
COL3A1P02461 MDM4-203ENST00000367182 10073 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL3A1P02461 RAB18-209ENST00000621805 4894 ntTSL 1 (best) BASIC6.46□□□□□ -1.38
COL3A1P02461 AC007382.1-201ENST00000624376 2618 ntBASIC6.46□□□□□ -1.38
COL3A1P02461 STS-201ENST00000217961 6521 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL3A1P02461 GUCA1C-201ENST00000261047 982 ntAPPRIS P1 TSL 1 (best) BASIC6.46□□□□□ -1.38
COL3A1P02461 KRTAP3-2-201ENST00000391587 702 ntAPPRIS P1 BASIC6.46□□□□□ -1.38
COL3A1P02461 AL078595.1-201ENST00000404458 226 ntBASIC6.46□□□□□ -1.38
COL3A1P02461 RPL26P29-201ENST00000415623 438 ntBASIC6.46□□□□□ -1.38
COL3A1P02461 LINC00993-201ENST00000420453 540 ntBASIC6.46□□□□□ -1.38
COL3A1P02461 AC004415.1-201ENST00000422697 449 ntTSL 3 BASIC6.46□□□□□ -1.38
COL3A1P02461 GRM7-AS3-203ENST00000424366 486 ntTSL 3 BASIC6.46□□□□□ -1.38
Retrieved 100 of 98,524 protein–RNA pairs in 76.6 ms