Protein–RNA interactions for Protein: O95096

NKX2-2, Homeobox protein Nkx-2.2, humanhuman

Predictions only

Length 273 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-2O95096 AL035090.1-201ENST00000454835 332 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 VN1R5-201ENST00000472952 1239 ntAPPRIS P1 BASIC5.04□□□□□ -1.6
NKX2-2O95096 RPL12P24-201ENST00000474907 486 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 RSRC1-207ENST00000475278 1195 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC139718.2-201ENST00000506068 481 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-2O95096 HMGB1P44-201ENST00000508597 572 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 FGB-207ENST00000509493 1164 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 ASNSP4-201ENST00000511103 447 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 COMMD10-206ENST00000515539 869 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-2O95096 SCARNA1-201ENST00000517138 166 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC010476.1-201ENST00000519111 851 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AP003066.2-201ENST00000529375 555 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 OR8G3P-201ENST00000533406 921 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC007424.1-205ENST00000552615 579 ntTSL 4 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC022404.1-201ENST00000555320 273 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AL357172.1-201ENST00000556016 593 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-2O95096 ZFAND6-208ENST00000558688 780 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC055855.2-201ENST00000565993 500 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC022166.1-201ENST00000567851 581 ntTSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AP005242.1-201ENST00000583946 467 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AL391001.1-201ENST00000602747 715 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 ASNSD1-208ENST00000607690 535 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-2O95096 ASNSD1-209ENST00000607829 581 ntTSL 2 BASIC5.04□□□□□ -1.6
NKX2-2O95096 OR2BH1P-201ENST00000608850 864 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC104763.3-201ENST00000613765 618 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC126175.1-201ENST00000617041 758 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC087633.2-201ENST00000618611 725 ntTSL 3 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC090772.4-201ENST00000623599 362 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AC011815.3-201ENST00000624194 473 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 AL691477.1-201ENST00000624398 162 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 PCDH11X-202ENST00000361655 4126 ntAPPRIS ALT2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 SGIP1-203ENST00000371037 7768 ntAPPRIS P3 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 C4orf17-201ENST00000326581 1636 ntAPPRIS P2 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 SLC26A7-210ENST00000617233 5257 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 FAM19A1-201ENST00000478136 2014 ntAPPRIS P1 TSL 1 (best) BASIC5.04□□□□□ -1.6
NKX2-2O95096 INO80D-201ENST00000403263 14136 ntAPPRIS P1 TSL 5 BASIC5.04□□□□□ -1.6
NKX2-2O95096 AC017007.4-201ENST00000503353 1352 ntBASIC5.04□□□□□ -1.6
NKX2-2O95096 VCAN-201ENST00000265077 12625 ntAPPRIS P3 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 GEN1-202ENST00000381254 6367 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 SLITRK4-202ENST00000356928 3074 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NKX2-2O95096 ARHGAP24-201ENST00000264343 4572 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 LGALS8-222ENST00000527974 1349 ntAPPRIS P4 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 KCNH5-201ENST00000322893 11290 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 C3orf67-209ENST00000482387 2617 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 FCRL2-203ENST00000368181 1669 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 MCM9-209ENST00000619706 4822 ntAPPRIS P1 TSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 NHSL2-204ENST00000631375 12593 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 CNTN1-202ENST00000348761 3328 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 CFAP97-201ENST00000296775 903 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 METTL21EP-201ENST00000298105 713 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 SNORA16A-201ENST00000384342 137 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AP002784.2-201ENST00000397300 549 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 PIGP-204ENST00000399102 688 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 RSL24D1P1-201ENST00000404972 493 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 LSM5-205ENST00000409952 687 ntTSL 4 BASIC5.03□□□□□ -1.6
NKX2-2O95096 RN7SKP293-201ENST00000411389 296 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AL355339.1-202ENST00000417542 458 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-2O95096 NLGN1-AS1-201ENST00000423873 815 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AC104843.2-201ENST00000427666 297 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 FO393419.3-201ENST00000428741 282 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 TXNDC12-AS1-201ENST00000428794 391 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AL358972.1-201ENST00000434356 466 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AL355339.1-201ENST00000434386 435 ntTSL 2 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AL136140.1-201ENST00000436113 473 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AL390119.1-201ENST00000440329 312 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AL355601.1-201ENST00000444701 427 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AC105399.1-202ENST00000447303 205 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AC092685.1-201ENST00000447960 1243 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AL157400.3-201ENST00000449882 1298 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 MTATP6P14-201ENST00000455189 673 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 OARD1-207ENST00000468811 819 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AP000797.2-201ENST00000475768 606 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AC090638.1-201ENST00000498296 909 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 JCHAIN-204ENST00000510437 640 ntAPPRIS P1 TSL 3 BASIC5.03□□□□□ -1.6
NKX2-2O95096 MTATP6P1-201ENST00000514057 681 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 SCARNA16.4-201ENST00000516956 187 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 RN7SKP99-201ENST00000517028 307 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AP003110.1-201ENST00000526976 717 ntTSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 AC007406.1-201ENST00000544067 315 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-2O95096 RN7SL356P-201ENST00000582228 248 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AC108738.1-201ENST00000603703 237 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AC104695.2-201ENST00000605056 775 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 TULP3P1-203ENST00000606237 586 ntTSL 4 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AC242426.3-203ENST00000606757 712 ntTSL 3 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AL031658.2-201ENST00000616850 651 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 AC243654.3-201ENST00000617427 735 ntTSL 5 BASIC5.03□□□□□ -1.6
NKX2-2O95096 PXT1-202ENST00000619547 619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 HOTTIP_3.1-201ENST00000619957 337 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 OR51F1-202ENST00000624103 939 ntAPPRIS ALT1 BASIC5.03□□□□□ -1.6
NKX2-2O95096 AC103703.1-201ENST00000634783 663 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 MYO5A-201ENST00000356338 11971 ntAPPRIS ALT1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 SERPINB7-207ENST00000546027 1951 ntAPPRIS P1 TSL 2 BASIC5.03□□□□□ -1.6
NKX2-2O95096 SLAIN1-202ENST00000314070 2118 ntAPPRIS ALT2 TSL 2 BASIC5.03□□□□□ -1.6
NKX2-2O95096 MTO1-212ENST00000498286 10857 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 LMNTD1-207ENST00000539744 1729 ntAPPRIS ALT2 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 SERPINB7-202ENST00000398019 2203 ntAPPRIS P1 TSL 1 (best) BASIC5.03□□□□□ -1.6
NKX2-2O95096 AL360270.2-201ENST00000562952 5985 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 BRAFP1-201ENST00000445336 2703 ntBASIC5.03□□□□□ -1.6
NKX2-2O95096 ZNF343-207ENST00000612935 3675 ntAPPRIS ALT2 TSL 5 BASIC5.02□□□□□ -1.61
NKX2-2O95096 ETV1-207ENST00000405358 4181 ntTSL 5 BASIC5.02□□□□□ -1.61
Retrieved 100 of 98,524 protein–RNA pairs in 88.3 ms